RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 LRRC20Q8TCA0 184 aa13.26□□□□□ -0.29
ABCF3-214ENST00000480562 PPP1R14DQ9NXH3 145 aa13.26□□□□□ -0.29
ABCF3-214ENST00000480562 NAP1L6A6NFF2 107 aa13.25□□□□□ -0.29
ABCF3-214ENST00000480562 SNRPCP09234 159 aaKnown RBP13.25□□□□□ -0.29
ABCF3-214ENST00000480562 SOHLH1Q5JUK2 328 aa13.25□□□□□ -0.29
ABCF3-214ENST00000480562 C1orf134Q5TEV5 83 aa13.25□□□□□ -0.29
ABCF3-214ENST00000480562 RBM38Q9H0Z9 239 aaKnown RBP13.25□□□□□ -0.29
ABCF3-214ENST00000480562 NPVFQ9HCQ7 196 aa13.25□□□□□ -0.29
ABCF3-214ENST00000480562 F5H768 121 aa13.24□□□□□ -0.29
ABCF3-214ENST00000480562 HTN1P15515 57 aa13.24□□□□□ -0.29
ABCF3-214ENST00000480562 IAH1Q2TAA2 248 aaPredicted RBP13.24□□□□□ -0.29
ABCF3-214ENST00000480562 C4orf46Q504U0 113 aa13.24□□□□□ -0.29
ABCF3-214ENST00000480562 OR10P1Q8NGE3 313 aa13.24□□□□□ -0.29
ABCF3-214ENST00000480562 RPUSD4Q96CM3 377 aaKnown RBP13.24□□□□□ -0.29
ABCF3-214ENST00000480562 ATG101Q9BSB4 218 aa13.24□□□□□ -0.29
ABCF3-214ENST00000480562 ARV1Q9H2C2 271 aa13.24□□□□□ -0.29
ABCF3-214ENST00000480562 MGAT4CQ9UBM8 478 aa13.24□□□□□ -0.29
ABCF3-214ENST00000480562 K7EPK0 472 aa13.23□□□□□ -0.29
ABCF3-214ENST00000480562 MRPS12O15235 138 aaKnown RBP13.23□□□□□ -0.29
ABCF3-214ENST00000480562 ARL16Q0P5N6 197 aa13.23□□□□□ -0.29
ABCF3-214ENST00000480562 TEPPQ6URK8 271 aa13.23□□□□□ -0.29
ABCF3-214ENST00000480562 ZNF575Q86XF7 245 aa13.23□□□□□ -0.29
ABCF3-214ENST00000480562 GSKIPQ9P0R6 139 aa13.23□□□□□ -0.29
ABCF3-214ENST00000480562 FNDC10F2Z333 226 aa13.22□□□□□ -0.29
ABCF3-214ENST00000480562 NUDT3O95989 172 aa13.22□□□□□ -0.29
ABCF3-214ENST00000480562 BTCP35070 178 aa13.22□□□□□ -0.29
ABCF3-214ENST00000480562 TAS2R60P59551 318 aa13.22□□□□□ -0.29
ABCF3-214ENST00000480562 S100A7AQ86SG5 101 aa13.22□□□□□ -0.29
ABCF3-214ENST00000480562 ZBTB8BQ8NAP8 495 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-214ENST00000480562 SDHCQ99643 169 aaPredicted RBP13.22□□□□□ -0.29
ABCF3-214ENST00000480562 RCL1Q9Y2P8 373 aaKnown RBP13.22□□□□□ -0.29
ABCF3-214ENST00000480562 HSPG2P98160 4391 aa13.22□□□□□ -0.29
ABCF3-214ENST00000480562 H3BTX0 84 aa13.21□□□□□ -0.29
ABCF3-214ENST00000480562 GOSR2O14653 212 aa13.21□□□□□ -0.29
ABCF3-214ENST00000480562 TSC22D2O75157 780 aa13.21□□□□□ -0.29
ABCF3-214ENST00000480562 ATP5G1P05496 136 aa13.21□□□□□ -0.29
ABCF3-214ENST00000480562 ATP5G3P48201 142 aa13.21□□□□□ -0.29
ABCF3-214ENST00000480562 FAM3BP58499 235 aaPredicted RBP13.21□□□□□ -0.29
ABCF3-214ENST00000480562 LINC00305Q7Z4B0 112 aa13.21□□□□□ -0.29
ABCF3-214ENST00000480562 TMEM256Q8N2U0 113 aa13.21□□□□□ -0.29
ABCF3-214ENST00000480562 MUC4Q99102 2169 aa13.21□□□□□ -0.3
ABCF3-214ENST00000480562 CBY3A6NI87 242 aa13.2□□□□□ -0.3
ABCF3-214ENST00000480562 AGPAT2O15120 278 aa13.2□□□□□ -0.3
ABCF3-214ENST00000480562 TAS2R30P59541 319 aa13.2□□□□□ -0.3
ABCF3-214ENST00000480562 KIR3DS1Q14943 382 aa13.2□□□□□ -0.3
ABCF3-214ENST00000480562 LCN15Q6UWW0 184 aa13.2□□□□□ -0.3
ABCF3-214ENST00000480562 ZNF546Q86UE3 836 aa13.2□□□□□ -0.3
ABCF3-214ENST00000480562 C16orf74Q96GX8 76 aa13.2□□□□□ -0.3
ABCF3-214ENST00000480562 PARD6GQ9BYG4 376 aaPredicted RBP13.2□□□□□ -0.3
ABCF3-214ENST00000480562 ZNF331Q9NQX6 463 aaPredicted RBP13.2□□□□□ -0.3
ABCF3-214ENST00000480562 C7orf66A4D0T2 115 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 MBPP02686 304 aaPredicted RBP13.19□□□□□ -0.3
ABCF3-214ENST00000480562 CDKN1BP46527 198 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 PXDC1Q5TGL8 231 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 MORN5Q5VZ52 161 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 ZNRF2Q8NHG8 242 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 MITD1Q8WV92 249 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 MGST2Q99735 147 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 NOP10Q9NPE3 64 aaKnown RBP13.19□□□□□ -0.3
ABCF3-214ENST00000480562 RNF24Q9Y225 148 aa13.19□□□□□ -0.3
ABCF3-214ENST00000480562 LRP1BQ9NZR2 4599 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 ABCA13Q86UQ4 5058 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 CENPXA8MT69 81 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 PRAC2D3DTV9 90 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 ZNF701M0R085 212 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-214ENST00000480562 SLC17A3O00476 420 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 CCSO14618 274 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 COX7A2P2O60397 106 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 CXCL2P19875 107 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 RNF141Q8WVD5 230 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 TMEM37Q8WXS4 190 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 SLC50A1Q9BRV3 221 aa13.18□□□□□ -0.3
ABCF3-214ENST00000480562 TIMM8BQ9Y5J9 83 aaPredicted RBP13.18□□□□□ -0.3
ABCF3-214ENST00000480562 NBDYA0A0U1RRE5 68 aa13.17□□□□□ -0.3
ABCF3-214ENST00000480562 TNP2Q05952 138 aa13.17□□□□□ -0.3
ABCF3-214ENST00000480562 BPIFA4PQ86YQ2 179 aa13.17□□□□□ -0.3
ABCF3-214ENST00000480562 RNASE8Q8TDE3 154 aaKnown RBP13.17□□□□□ -0.3
ABCF3-214ENST00000480562 GGACTQ9BVM4 153 aa13.17□□□□□ -0.3
ABCF3-214ENST00000480562 LINC00588Q9Y4M8 146 aa13.17□□□□□ -0.3
ABCF3-214ENST00000480562 H7BYZ3 331 aa13.16□□□□□ -0.3
ABCF3-214ENST00000480562 IL7P13232 177 aa13.16□□□□□ -0.3
ABCF3-214ENST00000480562 CCL18P55774 89 aa13.16□□□□□ -0.3
ABCF3-214ENST00000480562 OPCMLQ14982 345 aa13.16□□□□□ -0.3
ABCF3-214ENST00000480562 ZNF493Q6ZR52 646 aa13.16□□□□□ -0.3
ABCF3-214ENST00000480562 TMEM263Q8WUH6 116 aaKnown RBP13.16□□□□□ -0.3
ABCF3-214ENST00000480562 H3BQ15 152 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 J3KRW8 73 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 L7N2F9 121 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 VAMP2P63027 116 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 GFI1BQ5VTD9 330 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 C10orf113Q5VZT2 155 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 OR10J6PQ8NGY7 276 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 C20orf85Q9H1P6 137 aa13.15□□□□□ -0.3
ABCF3-214ENST00000480562 LSM5Q9Y4Y9 91 aaKnown RBP13.15□□□□□ -0.3
ABCF3-214ENST00000480562 TRAV5A0A0B4J249 113 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 FAM25EA8MYX2 175 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 IGLC2P0DOY2 106 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 CAMLGP49069 296 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 BCAP31P51572 246 aa13.14□□□□□ -0.31
ABCF3-214ENST00000480562 OR5I1Q13606 314 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 155.6 ms