RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 ZNF32P17041 273 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 KDELR1P24390 212 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 NFYBP25208 207 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 CD52P31358 61 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 GUCA1AP43080 201 aaPredicted RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 RAB5CP51148 216 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 COPZ1P61923 177 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 HIST1H4AP62805 103 aaKnown RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 SLC38A11Q08AI6 406 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 OR8G1Q15617 311 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 HIGD2BQ4VC39 106 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 LUZP6Q538Z0 58 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 RNASE13Q5GAN3 156 aaKnown RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 C1orf140Q5VVS0 124 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 HRCT1Q6UXD1 115 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 LCA10Q71F78 164 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 GPHB5Q86YW7 130 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 MSRB3Q8IXL7 192 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 AMN1Q8IY45 258 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 C8orf59Q8N0T1 100 aaPredicted RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 OR4S1Q8NGB4 309 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 OR51A4Q8NGJ6 313 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 OR4A5Q8NH83 315 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 RHOXF1Q8NHV9 184 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 PPTC7Q8NI37 304 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF418Q8TF45 676 aaPredicted RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 H1FXQ92522 213 aaKnown RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 ZNF414Q96IQ9 312 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 TEX37Q96LM6 180 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 PEBP4Q96S96 227 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 TBL1YQ9BQ87 522 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 PYGO2Q9BRQ0 406 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 PSMG3Q9BT73 122 aaPredicted RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 SHANK2-AS3Q9BTD1 123 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 DEFB126Q9BYW3 111 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 XAGE1AQ9HD64 81 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 NUP205Q92621 2012 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 MCM3APO60318 1980 aa2.03□□□□□ -2.08
HMGN4-202ENST00000477243 AHNAKQ09666 5890 aaKnown RBP2.03□□□□□ -2.08
HMGN4-202ENST00000477243 SIPA1L1O43166 1804 aa2.03□□□□□ -2.09
HMGN4-202ENST00000477243 DYNC2H1Q8NCM8 4307 aaKnown RBP2.03□□□□□ -2.09
HMGN4-202ENST00000477243 PTPRBP23467 1997 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 MYH6P13533 1939 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 IGHV3-21A0A0B4J1V1 117 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 IGHV3-43A0A0B4J1X8 118 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 TRAV41A0A0B4J266 112 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 A0A1B0GVX0 72 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 A0A1W2PP18 115 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 A0A1W2PPR1 153 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 DHRS12A0PJE2 317 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 NDUFAF8A1L188 74 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 IFITM10A6NMD0 228 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 H7BYZ3 331 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 J3QQQ9 107 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 CORTO00230 105 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 TAX1BP3O14907 124 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 ZNF73O43830 326 aaPredicted RBP2.02□□□□□ -2.09
HMGN4-202ENST00000477243 LYZL6O75951 148 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 CST7O76096 145 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 NDUFB2O95178 105 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 C1QAP02745 245 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 IGKV2-30P06310 120 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 PAEPP09466 180 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 LGALS3P17931 250 aaKnown RBP2.02□□□□□ -2.09
HMGN4-202ENST00000477243 SDC2P34741 201 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 RPL27AP46776 148 aaKnown RBP2.02□□□□□ -2.09
HMGN4-202ENST00000477243 CSN1S1P47710 185 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 AKR1D1P51857 326 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 TMBIM6P55061 237 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 NANOS2P60321 138 aaKnown RBP2.02□□□□□ -2.09
HMGN4-202ENST00000477243 MAXP61244 160 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 UBE2SQ16763 222 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 SPANXN3Q5MJ09 141 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 GLYATL3Q5SZD4 288 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 FAM104BQ5XKR9 115 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 SSX8Q7RTT4 187 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 TRAPPC6BQ86SZ2 158 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 LHFPL1Q86WI0 220 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 CTAGE3PQ8IX95 158 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 ACBD7Q8N6N7 88 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 TCTEX1D1Q8N7M0 179 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 Q8N7P7 452 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 Q8N976 141 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 OR11G2Q8NGC1 345 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 OR5A2Q8NGI9 324 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 OR2T10Q8NGZ9 312 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 C1orf147Q96MC9 270 aaPredicted RBP2.02□□□□□ -2.09
HMGN4-202ENST00000477243 YPEL2Q96QA6 119 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 MGLLQ99685 303 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 NRTNQ99748 197 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 IL36BQ9NZH7 164 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 NAT8Q9UHE5 227 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 ZNF230Q9UIE0 474 aaPredicted RBP2.02□□□□□ -2.09
HMGN4-202ENST00000477243 FUT9Q9Y231 359 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 TMEM14AQ9Y6G1 99 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 TANC1Q9C0D5 1861 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 PLXNA4Q9HCM2 1894 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 KNL1Q8NG31 2342 aa2.02□□□□□ -2.09
HMGN4-202ENST00000477243 HCFC1P51610 2035 aa2.01□□□□□ -2.09
HMGN4-202ENST00000477243 DOCK2Q92608 1830 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms