RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 COMMD6Q7Z4G1 85 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 ZNF101Q8IZC7 436 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 LINC00337Q8N6G1 96 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 C11orf72Q8NBR9 251 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 WFDC11Q8NEX6 87 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 OR10P1Q8NGE3 313 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 OR2T10Q8NGZ9 312 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 CMTM2Q8TAZ6 248 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 STAG3L4Q8TBR4 150 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 SCGB1C1Q8TD33 95 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 ZNF721Q8TF20 911 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 DCANP1Q8TF63 244 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 PPDPFLQ8WWR9 84 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 FXYD5Q96DB9 178 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 C18orf15Q96N68 181 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 MCEEQ96PE7 176 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 NMNAT3Q96T66 252 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 PMCHL2Q9BQD1 86 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 IMUPQ9GZP8 106 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 COMMD5Q9GZQ3 224 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 FXYD6Q9H0Q3 95 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 ESM1Q9NQ30 184 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 AIG1Q9NVV5 245 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 FIS1Q9Y3D6 152 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 KCNE3Q9Y6H6 103 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 SERP1Q9Y6X1 66 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 HLA-DRB4X5D2U9 266 aa1.78□□□□□ -2.12
XRN1-211ENST00000477237 LAMB2P55268 1798 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 QSER1Q2KHR3 1735 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 WDR90Q96KV7 1748 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 ADAMTS7Q9UKP4 1686 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 CEP170Q5SW79 1584 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 KCPQ6ZWJ8 1503 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 MRC1P22897 1456 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 TRGV5A0A0B4J1U4 118 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 TRAV41A0A0B4J266 112 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 IGHV3OR16-9A0A0B4J2B5 98 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 H3BP45 60 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 H3BUT2 72 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 APOC4-APOC2K7ER74 178 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 LGALS9O00182 355 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 LST1O00453 97 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 ZNF737O75373 536 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 SNCGO76070 127 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 APOMO95445 188 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 FSTL3O95633 263 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 SOD1P00441 154 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 TRACP01848 142 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 APOC2P02655 101 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 HSPB1P04792 205 aaKnown RBP1.77□□□□□ -2.13
XRN1-211ENST00000477237 GYPBP06028 91 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 ZNF688P0C7X2 276 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 COL8A2P25067 703 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 INPP1P49441 399 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 PSMB3P49720 205 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 NDUFA8P51970 172 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 GNB2P62879 340 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 PRR3P79522 188 aaKnown RBP1.77□□□□□ -2.13
XRN1-211ENST00000477237 LGALS9BQ3B8N2 356 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 NSUN5P1Q3KNT7 163 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 ETDBQ3ZM63 59 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 FP248Q71RG6 208 aaPredicted RBP1.77□□□□□ -2.13
XRN1-211ENST00000477237 LINC00305Q7Z4B0 112 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 ATP5L2Q7Z4Y8 100 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 FAM19A3Q7Z5A8 133 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 SPATA12Q7Z6I5 190 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 TEN1Q86WV5 123 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 MKXQ8IYA7 352 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 C6orf223Q8N319 242 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 DRAM1Q8N682 238 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 RNF182Q8N6D2 247 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 C3orf56Q8N813 242 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 OR9G1Q8NH87 305 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 OR2A5Q96R48 311 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 DSCR8Q96T75 97 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 PAXXQ9BUH6 204 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 SLC35B3Q9H1N7 401 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 C11orf68Q9H3H3 251 aaKnown RBP1.77□□□□□ -2.13
XRN1-211ENST00000477237 FAM60AQ9NP50 221 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 HHLA3Q9XRX5 114 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 STRCP1A6NGW2 1772 aa1.77□□□□□ -2.13
XRN1-211ENST00000477237 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.77□□□□□ -2.13
XRN1-211ENST00000477237 SAMD9LQ8IVG5 1584 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 MCM3APO60318 1980 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TICRRQ7Z2Z1 1910 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TSC2P49815 1807 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 AFDNP55196 1824 aaKnown RBP1.76□□□□□ -2.13
XRN1-211ENST00000477237 SLX4Q8IY92 1834 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 KIAA1671Q9BY89 1806 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TRBV6-7A0A0A0MS04 114 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TRAV8-3A0A0A6YYJ7 113 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 TRAV8-1A0A0A6YYK1 113 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 IGKV1D-43A0A0B4J1Z2 117 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 IGKV6-21A0A0C4DH24 114 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 A0A0D9SEW6 157 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 IRGMA1A4Y4 181 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 A8MUN3 132 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 A8MWL6 223 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 A8MWV9 139 aa1.76□□□□□ -2.13
XRN1-211ENST00000477237 C11orf98E9PRG8 122 aa1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms