RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 NFYAP23511 347 aaPredicted RBP2.44□□□□□ -2.02
VPS13D-207ENST00000476169 TMBIM6P55061 237 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 SUPT4H1P63272 117 aaKnown RBP2.44□□□□□ -2.02
VPS13D-207ENST00000476169 RHOGP84095 191 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 PLCXD2Q0VAA5 305 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 MOBPQ13875 183 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 SMIM21Q3B7S5 101 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 C1orf140Q5VVS0 124 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 SIGLECL1Q8N7X8 197 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 TMEM229BQ8NBD8 167 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 OR5A1Q8NGJ0 315 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 TEX37Q96LM6 180 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 CARD19Q96LW7 228 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 SLC25A21Q9BQT8 299 aaPredicted RBP2.44□□□□□ -2.02
VPS13D-207ENST00000476169 MED31Q9Y3C7 131 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 DOCK2Q92608 1830 aa2.44□□□□□ -2.02
VPS13D-207ENST00000476169 PHIPQ8WWQ0 1821 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 TRAV36DV7A0A075B6V5 113 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 A0A087WX48 190 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 A0A0D9SEW6 157 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 TRDV1A0A1B0GX56 115 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 TMEM212A6NML5 194 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 GABARAPH6UMI1 98 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 H7C2G1 150 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 CST7O76096 145 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 IGKV1-16P04430 117 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 IL9P15248 144 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 NDUFA6P56556 154 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 RPS28P62857 69 aaKnown RBP2.43□□□□□ -2.02
VPS13D-207ENST00000476169 RELAQ04206 551 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 MSMO1Q15800 293 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 LYZL1Q6UWQ5 148 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 RPP25LQ8N5L8 163 aaKnown RBP2.43□□□□□ -2.02
VPS13D-207ENST00000476169 WFDC11Q8NEX6 87 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 OR4C16Q8NGL9 310 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 OR2T10Q8NGZ9 312 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 ZNF714Q96N38 554 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
VPS13D-207ENST00000476169 MRPL32Q9BYC8 188 aaKnown RBP2.43□□□□□ -2.02
VPS13D-207ENST00000476169 TMEM133Q9H2Q1 129 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 COPZ2Q9P299 210 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 NAT8BQ9UHF3 227 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 FAM215AQ9Y5M1 114 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 COL1A2P08123 1366 aa2.43□□□□□ -2.02
VPS13D-207ENST00000476169 COL27A1Q8IZC6 1860 aaPredicted RBP2.43□□□□□ -2.02
VPS13D-207ENST00000476169 CCDC88AQ3V6T2 1871 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 TRAV7A0A075B6U4 112 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 TRGV10A0A0A0MS01 117 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 IGKV1-9A0A0C4DH69 117 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 OVOL1O14753 267 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 TCL1BO95988 128 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 NAPSAO96009 420 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 CXCL1P09341 107 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 FABP2P12104 132 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 HRES1P13985 223 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 FKBP2P26885 142 aaKnown RBP2.42□□□□□ -2.02
VPS13D-207ENST00000476169 DYNLT3P51808 116 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 FOXF1Q12946 379 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 EIF3IQ13347 325 aaKnown RBP2.42□□□□□ -2.02
VPS13D-207ENST00000476169 EIF5AL1Q6IS14 154 aaKnown RBP2.42□□□□□ -2.02
VPS13D-207ENST00000476169 OR8I2Q8N0Y5 310 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 RNASE11Q8TAA1 199 aaKnown RBP2.42□□□□□ -2.02
VPS13D-207ENST00000476169 NPCDR1Q9BY65 106 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 OR2H1Q9GZK4 316 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 POPDC3Q9HBV1 291 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 OTORQ9NRC9 128 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 CYTL1Q9NRR1 136 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 HSPB8Q9UJY1 196 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 HHLA3Q9XRX5 114 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 PLXNB2O15031 1838 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 ZNF236Q9UL36 1845 aa2.42□□□□□ -2.02
VPS13D-207ENST00000476169 A0A0D9SG52 128 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 A0A1B0GX51 115 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 EFCAB10A6NFE3 127 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 RFPL4AA6NLU0 287 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 C5orf67F2Z3F1 127 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 RFPL4AL1F8VTS6 287 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 H7BYZ3 331 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 HCRTO43612 131 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 NDUFB3O43676 98 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 IGKV3-11P04433 115 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 HINT1P49773 126 aaPredicted RBP2.41□□□□□ -2.02
VPS13D-207ENST00000476169 ARPP19P56211 112 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 LINC00315P59091 139 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 MYL5Q02045 173 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 C22orf39Q6P5X5 142 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 LINC00301Q8NCQ3 95 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 OR4E2Q8NGC2 313 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 PFN4Q8NHR9 129 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 CMTM2Q8TAZ6 248 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 MRPS24Q96EL2 167 aaKnown RBP2.41□□□□□ -2.02
VPS13D-207ENST00000476169 ZC2HC1AQ96GY0 325 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 AP1S3Q96PC3 154 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 VPS25Q9BRG1 176 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 PRADC1Q9BSG0 188 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 TCEAL2Q9H3H9 227 aaPredicted RBP2.41□□□□□ -2.02
VPS13D-207ENST00000476169 PAIP2BQ9ULR5 123 aaKnown RBP2.41□□□□□ -2.02
VPS13D-207ENST00000476169 EPDR1Q9UM22 224 aa2.41□□□□□ -2.02
VPS13D-207ENST00000476169 CASP8AP2Q9UKL3 1982 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 189.5 ms