RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 PLEKHA3Q9HB20 300 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 BCL2L10Q9HD36 194 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 CALYQ9NYX4 217 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 NUP210Q8TEM1 1887 aaPredicted RBP4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 TRAV8-3A0A0A6YYJ7 113 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 LOC107986453A0A1B0GWG9 222 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 A0A1W2PPM0 123 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 M0R129 80 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 FFAR1O14842 300 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 ACVRL1P37023 503 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 RNF182Q8N6D2 247 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 OR10P1Q8NGE3 313 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 OR9G1Q8NH87 305 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 NABP1Q96AH0 204 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 FXYD5Q96DB9 178 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 MS4A6EQ96DS6 147 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 OR2A5Q96R48 311 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 PLAC1Q9HBJ0 212 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 AIG1Q9NVV5 245 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 OCIAD1Q9NX40 245 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 COQ4Q9Y3A0 265 aa4.72□□□□□ -1.65
SMARCE1-208ENST00000474246 CUBNO60494 3623 aa4.71□□□□□ -1.65
SMARCE1-208ENST00000474246 TDRD15B5MCY1 1934 aaKnown RBP4.71□□□□□ -1.65
SMARCE1-208ENST00000474246 TRAV19A0A0A6YYK7 116 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 IGHV3OR16-9A0A0B4J2B5 98 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 IGHV1-58A0A0C4DH39 117 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 A0A0G2JND7 137 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 KANTRA0A1W2PQU2 76 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 IRGMA1A4Y4 181 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 RBMY1BA6NDE4 496 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 RBMY1EA6NEQ0 496 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 RBMY1DP0C7P1 496 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 RBMY1A1P0DJD3 496 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 INPP1P49441 399 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 NDUFA8P51970 172 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 ERCC8Q13216 396 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 KRTAP24-1Q3LI83 254 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 ZIC4Q8N9L1 334 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 LRRC29Q8WV35 223 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 SRXN1Q9BYN0 137 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 LINC00527Q9UJ94 153 aa4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 PRRC2AP48634 2157 aaKnown RBP4.71□□□□□ -1.66
SMARCE1-208ENST00000474246 PRRC2CQ9Y520 2896 aaKnown RBP4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 IGKV1D-13A0A0B4J2D9 117 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 IGKV1-13P0DP09 117 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 CRISP2P16562 243 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 FOXF1Q12946 379 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 DPPA3Q6W0C5 159 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 Q6ZS49 121 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 TMEM75Q8N9X5 138 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 C20orf78Q9BR46 151 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 C16orf95Q9H693 158 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 ARID2Q68CP9 1835 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 HERC2O95714 4834 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 LRP4O75096 1905 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 IGHV1OR21-1A0A087WYE8 117 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 H0YIZ8 118 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 H3BMG7 143 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 LGALS9O00182 355 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 CDK2AP2O75956 126 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 NDUFB2O95178 105 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 CD3DP04234 171 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 TCRAP04437 139 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 SLC25A4P12235 298 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 TPT1P13693 172 aaKnown RBP4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 LSM3P62310 102 aaKnown RBP4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 CLLU1OSQ5K130 101 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 RFLNAQ6ZTI6 216 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 RFESDQ8TAC1 157 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 VGLL1Q99990 258 aa4.7□□□□□ -1.66
SMARCE1-208ENST00000474246 ETV2O00321 342 aaPredicted RBP4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 RBP4P02753 201 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 GATA2P23769 480 aaPredicted RBP4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 CD70P32970 193 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 CXCL5P42830 114 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 GTSCR1Q86UQ5 136 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 WFDC11Q8NEX6 87 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 SHANK2-AS3Q9BTD1 123 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 KRTAP4-9Q9BYQ8 210 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 SLC35B3Q9H1N7 401 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 CKLFQ9UBR5 152 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 TNRC6AQ8NDV7 1962 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 A0A1B0GVT2 93 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 UBE2L6O14933 153 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 SCRG1O75711 98 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 CST7O76096 145 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 CXCL1P09341 107 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 TAS2R19P59542 299 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 MRPS21P82921 87 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 LGALS9BQ3B8N2 356 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 MPV17L2Q567V2 206 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 LINC01545Q5VT33 79 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 DEFB107AQ8IZN7 70 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 DRAM1Q8N682 238 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 C11orf72Q8NBR9 251 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 MRPL30Q8TCC3 161 aaKnown RBP4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 FAM60AQ9NP50 221 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 SERP1Q9Y6X1 66 aa4.69□□□□□ -1.66
SMARCE1-208ENST00000474246 BAZ2BQ9UIF8 2168 aaKnown RBP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms