RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 ERVFC1-1P60608 527 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 LSM3P62310 102 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SRSF3P84103 164 aaKnown RBP3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 LRP2P98164 4655 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 ICAM4Q14773 271 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 KIR3DS1Q14943 382 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SCGB2B2Q4G0G5 96 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM268Q5VZI3 342 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 TEPPQ6URK8 271 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 ZNF493Q6ZR52 646 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM144Q7Z5S9 345 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 RNF182Q8N6D2 247 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 THAP8Q8NA92 274 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 OR4D5Q8NGN0 318 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 DTD1Q8TEA8 209 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SLC35E1Q96K37 410 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 LINC01587Q99440 93 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 TRGV9Q99603 122 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 RTBDNQ9BSG5 229 aaPredicted RBP3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SLC25A22Q9H936 323 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 MTFP1Q9UDX5 166 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 SLC45A2Q9UMX9 530 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM56-RWDD3S4R434 201 aa3.51□□□□□ -1.85
SNRNP40-204ENST00000474025 A0A087WTM6 91 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 A0A096LPF7 62 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 CRYM-AS1A6NIL9 109 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 KRTAP29-1A8MX34 341 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 H7BYZ3 331 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 ADAP1O75689 374 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 RAB3DO95716 219 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 CFDP00746 253 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 CCR6P51684 374 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 ATP5IP56385 69 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 HAMPP81172 84 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 HIST1H1AQ02539 215 aaPredicted RBP3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 GPR107Q5VW38 600 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 GGNBP1Q5YKI7 109 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 FAAP20Q6NZ36 180 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 STEAP1BQ6NZ63 245 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 Q6ZSN1 163 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM229BQ8NBD8 167 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 ZNF738Q8NE65 137 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 OR8A1Q8NGG7 326 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 OR1B1Q8NGR6 318 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 IL22RA2Q969J5 263 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 RAB24Q969Q5 203 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 YIPF6Q96EC8 236 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 VSIG2Q96IQ7 327 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 GPR82Q96P67 336 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 RBKSQ9H477 322 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 PLA2G2DQ9UNK4 145 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 C14orf166Q9Y224 244 aaKnown RBP3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 TNFRSF18Q9Y5U5 241 aa3.5□□□□□ -1.85
SNRNP40-204ENST00000474025 RNF213Q63HN8 5207 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 A0A0B4J2A0 478 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 GAGE12BA1L429 117 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 PRSS46E5RG02 174 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 H3BRN7 92 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 SIVA1O15304 175 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 GAGE7O76087 117 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 NXPH4O95158 308 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 GAGE12FP0CL80 117 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 GAGE12GP0CL81 117 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 GAGE12IP0CL82 117 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 PRB4P10163 310 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 ORM2P19652 201 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 CXCL3P19876 107 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 GATA2P23769 480 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 CDKN1BP46527 198 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 TAS2R19P59542 299 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 NCS1P62166 190 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 RHOBP62745 196 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 FGL1Q08830 312 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 RAB32Q13637 225 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 SMCO1Q147U7 214 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 SURF2Q15527 256 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM182Q6ZP80 229 aaPredicted RBP3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 LYZL2Q7Z4W2 148 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 BPIFCQ8NFQ6 507 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 C20orf144Q9BQM9 153 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 TMEM147Q9BVK8 224 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 TMPRSS5Q9H3S3 457 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 Q9H521 79 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 SHPKQ9UHJ6 478 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 GPR132Q9UNW8 380 aa3.49□□□□□ -1.85
SNRNP40-204ENST00000474025 A0A087X0K7 114 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 SNURFLB1AK76 121 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 FAM25AB3EWG3 89 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 FAM25CB3EWG5 89 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 FAM25GB3EWG6 89 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 PITX3O75364 302 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 TNFRSF6BO95407 300 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 RLN2P04090 185 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 IAPPP10997 89 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 RPL7P18124 248 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 GCSHP23434 173 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 VBP1P61758 197 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 RAB11AP62491 216 aa3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 DAZ2Q13117 558 aaKnown RBP3.48□□□□□ -1.85
SNRNP40-204ENST00000474025 PSG3Q16557 428 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms