RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 SMIM4Q8WVI0 70 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 SHANK2-AS3Q9BTD1 123 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 TMEM147Q9BVK8 224 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 PGPEP1Q9NXJ5 209 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 KCNIP3Q9Y2W7 256 aa8.61□□□□□ -1.03
TRAF4-209ENST00000473421 LINC00854A0A1B0GVQ3 168 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 H3BP45 60 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 H3BTX0 84 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 WRBO00258 174 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 CCNKO75909 580 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 CDKN1BP46527 198 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 TMBIM6P55061 237 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 GFI1BQ5VTD9 330 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 ZNF493Q6ZR52 646 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 ACOT7LQ6ZUV0 252 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 BPIFCQ8NFQ6 507 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 RPUSD4Q96CM3 377 aaKnown RBP8.6□□□□□ -1.03
TRAF4-209ENST00000473421 CACFD1Q9UGQ2 172 aa8.6□□□□□ -1.03
TRAF4-209ENST00000473421 ANKRD20A5PA0PJZ0 165 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 H7BYZ3 331 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 J3KRW8 73 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 RAB11AP62491 216 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 SSBP1Q04837 148 aaKnown RBP8.59□□□□□ -1.03
TRAF4-209ENST00000473421 OR10J6PQ8NGY7 276 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 FRZBQ92765 325 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 GPR82Q96P67 336 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 PRRT1Q99946 306 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 PPP1R14DQ9NXH3 145 aa8.59□□□□□ -1.03
TRAF4-209ENST00000473421 A0A087X0K7 114 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 A0A1B0GVG6 124 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 PMS2P5A8MQ11 134 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 SLC17A3O00476 420 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 RGS5O15539 181 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 CFDP00746 253 aaPredicted RBP8.58□□□□□ -1.04
TRAF4-209ENST00000473421 AKR1C1Q04828 323 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 SPANXN5Q5MJ07 72 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 MORN5Q5VZ52 161 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 Q6ZNX1 250 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 RAB2BQ8WUD1 216 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 AP3S1Q92572 193 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 C18orf15Q96N68 181 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 HIGD1AQ9Y241 93 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 UBR4Q5T4S7 5183 aa8.58□□□□□ -1.04
TRAF4-209ENST00000473421 A0A087WTM6 91 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 TRAV12-3A0A0B4J271 114 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 H3BNG1 76 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 SIVA1O15304 175 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 SYNGR2O43760 224 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 OR5G3P0C626 314 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 SPCS2Q15005 226 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 TMED4Q7Z7H5 227 aa8.57□□□□□ -1.04
TRAF4-209ENST00000473421 CTDSPLO15194 276 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 HYPMO75409 117 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 NXPH4O95158 308 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 RLN2P04090 185 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 IL5P05113 134 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 LINC00869P0C866 280 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 CT45A10P0DMU9 189 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 RPL7P18124 248 aaKnown RBP8.56□□□□□ -1.04
TRAF4-209ENST00000473421 ICAM4Q14773 271 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 C15orf40Q8WUR7 153 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 ZNF331Q9NQX6 463 aaPredicted RBP8.56□□□□□ -1.04
TRAF4-209ENST00000473421 MCUBQ9NWR8 336 aa8.56□□□□□ -1.04
TRAF4-209ENST00000473421 HMCN2Q8NDA2 5059 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 SMCO3A2RU48 225 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 PLP1P60201 277 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 ERVFC1-1P60608 527 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 MRPS10P82664 201 aaKnown RBP8.55□□□□□ -1.04
TRAF4-209ENST00000473421 IL18Q14116 193 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 Q6ZQT7 251 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 CCDC190Q86UF4 302 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 ZNF431Q8TF32 576 aaPredicted RBP8.55□□□□□ -1.04
TRAF4-209ENST00000473421 GSN-AS1Q9NRJ2 163 aa8.55□□□□□ -1.04
TRAF4-209ENST00000473421 DNAH8Q96JB1 4490 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 H3BMQ9 156 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 H3BQ15 152 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 HOXB5P09067 269 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 RAP2BP61225 183 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 RRAS2P62070 204 aaPredicted RBP8.54□□□□□ -1.04
TRAF4-209ENST00000473421 POLR2GP62487 172 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRAF4-209ENST00000473421 DAZ2Q13117 558 aaKnown RBP8.54□□□□□ -1.04
TRAF4-209ENST00000473421 CDPF1Q6NVV7 123 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 CCDC28AQ8IWP9 274 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 LRRC20Q8TCA0 184 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 S100ZQ8WXG8 99 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 DIRAS2Q96HU8 199 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 ARL6Q9H0F7 186 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 SCP2D1Q9UJQ7 156 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 RABL2BQ9UNT1 228 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 KLF12Q9Y4X4 402 aa8.54□□□□□ -1.04
TRAF4-209ENST00000473421 SNURFLB1AK76 121 aa8.53□□□□□ -1.04
TRAF4-209ENST00000473421 ADAP1O75689 374 aa8.53□□□□□ -1.04
TRAF4-209ENST00000473421 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
TRAF4-209ENST00000473421 SLC25A6P12236 298 aa8.53□□□□□ -1.04
TRAF4-209ENST00000473421 SRPXP78539 464 aa8.53□□□□□ -1.04
TRAF4-209ENST00000473421 SLC38A11Q08AI6 406 aa8.53□□□□□ -1.04
TRAF4-209ENST00000473421 TEPPQ6URK8 271 aa8.53□□□□□ -1.04
TRAF4-209ENST00000473421 LRTM2Q8N967 370 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms