RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 C10orf113Q5VZT2 155 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 LINC00305Q7Z4B0 112 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 FAM24BQ8N5W8 94 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 HSD17B11Q8NBQ5 300 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 OR11H4Q8NGC9 324 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 OR1L4Q8NGR5 311 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 DCANP1Q8TF63 244 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 TMEM37Q8WXS4 190 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 PFDN5Q99471 154 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 PARD6GQ9BYG4 376 aaPredicted RBP6.77□□□□□ -1.33
SMC4-213ENST00000472282 MFFQ9GZY8 342 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 TUBA4BQ9H853 241 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 KCNIP2Q9NS61 270 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 RFNGQ9Y644 331 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 TENM2Q9NT68 2774 aa6.77□□□□□ -1.33
SMC4-213ENST00000472282 HYDINQ4G0P3 5121 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 TRAV2A0A0B4J234 112 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 OR11H12B2RN74 326 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 ZNF688P0C7X2 276 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 GALR1P47211 349 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 GCSAMLQ5JQS6 135 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 FFAR4Q5NUL3 377 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 MORN5Q5VZ52 161 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 RPL7L1Q6DKI1 246 aaKnown RBP6.76□□□□□ -1.33
SMC4-213ENST00000472282 S100A7AQ86SG5 101 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 AKAP14Q86UN6 197 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 TCTE3Q8IZS6 198 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 GPR82Q96P67 336 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 SRD5A3Q9H8P0 318 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 MAP6D1Q9H9H5 199 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 DNAJC4Q9NNZ3 241 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 NRN1Q9NPD7 142 aa6.76□□□□□ -1.33
SMC4-213ENST00000472282 LCE6AA0A183 80 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 HMSDA8MTL9 139 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 RPL7P18124 248 aaKnown RBP6.75□□□□□ -1.33
SMC4-213ENST00000472282 ATF4P18848 351 aaPredicted RBP6.75□□□□□ -1.33
SMC4-213ENST00000472282 DEFB131AP59861 70 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 CD300CQ08708 224 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 ZNF345Q14585 488 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 SPATA31B1PQ5VZV4 182 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 APRG1Q8IVJ8 170 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 GATAD1Q8WUU5 269 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 TIMM9Q9Y5J7 89 aa6.75□□□□□ -1.33
SMC4-213ENST00000472282 CSMD3Q7Z407 3707 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 BORCS7-ASMTA0A0B4J1R7 106 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 TRAV5A0A0B4J249 113 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 MRPS12O15235 138 aaKnown RBP6.74□□□□□ -1.33
SMC4-213ENST00000472282 CXCL2P19875 107 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 ATP6V0CP27449 155 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 FAM78BQ5VT40 261 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 KCNRGQ8N5I3 272 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 C17orf77Q96MU5 243 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 RNF24Q9Y225 148 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 DNAH1Q9P2D7 4330 aa6.74□□□□□ -1.33
SMC4-213ENST00000472282 A0A087X0K7 114 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 A0A0D9SG52 128 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 SOCS3O14543 225 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 TAAR5O14804 337 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 C1QBP02746 253 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 SNRPCP09234 159 aaKnown RBP6.73□□□□□ -1.33
SMC4-213ENST00000472282 MEOX2P50222 304 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
SMC4-213ENST00000472282 RAB2AP61019 212 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 PSMG4Q5JS54 123 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 MIR17HGQ75NE6 70 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 BPIFA4PQ86YQ2 179 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 ARPC5LQ9BPX5 153 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 PSMG3Q9BT73 122 aaPredicted RBP6.73□□□□□ -1.33
SMC4-213ENST00000472282 MRPL32Q9BYC8 188 aaKnown RBP6.73□□□□□ -1.33
SMC4-213ENST00000472282 SH3BGRL3Q9H299 93 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 SEPSECSQ9HD40 501 aaKnown RBP6.73□□□□□ -1.33
SMC4-213ENST00000472282 CYTL1Q9NRR1 136 aa6.73□□□□□ -1.33
SMC4-213ENST00000472282 EPPK1P58107 5090 aaKnown RBP6.73□□□□□ -1.33
SMC4-213ENST00000472282 KANTRA0A1W2PQU2 76 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 H3BTX0 84 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 ISLRO14498 428 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 BCL2L11O43521 198 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 EIF3GO75821 320 aaKnown RBP eCLIP6.72□□□□□ -1.338e-13■■■■■ 59.2
SMC4-213ENST00000472282 JTBO76095 146 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 PYYP10082 97 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 M6PRP20645 277 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 ID1P41134 155 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 PSMB3P49720 205 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 SNRPD3P62318 126 aaKnown RBP6.72□□□□□ -1.33
SMC4-213ENST00000472282 PLECQ15149 4684 aaKnown RBP6.72□□□□□ -1.33
SMC4-213ENST00000472282 ACOT6Q3I5F7 207 aaPredicted RBP6.72□□□□□ -1.33
SMC4-213ENST00000472282 ANKRD39Q53RE8 183 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 FAM122CQ6P4D5 195 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 TMUB2Q71RG4 321 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 OR2G3Q8NGZ4 309 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 GNPNAT1Q96EK6 184 aaPredicted RBP6.72□□□□□ -1.33
SMC4-213ENST00000472282 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 SLC25A2Q9BXI2 301 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 FUT9Q9Y231 359 aa6.72□□□□□ -1.33
SMC4-213ENST00000472282 LOC102724200A0A096LPH7 203 aaPredicted RBP6.71□□□□□ -1.34
SMC4-213ENST00000472282 TRAV8-2A0A0B4J237 113 aa6.71□□□□□ -1.34
SMC4-213ENST00000472282 KNCNA6PVL3 124 aa6.71□□□□□ -1.34
SMC4-213ENST00000472282 H3BQ15 152 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms