RNA–Protein interactions for RNA: ENST00000471488.1

HDAC1-204, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-204ENST00000471488 ARL6IP6Q8N6S5 226 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 BPIFCQ8NFQ6 507 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 OR1S1Q8NH92 325 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 LHFPL5Q8TAF8 219 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 SUN5Q8TC36 379 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 GPX8Q8TED1 209 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 NTN5Q8WTR8 489 aaPredicted RBP4.64□□□□□ -1.67
HDAC1-204ENST00000471488 PCNPQ8WW12 178 aaKnown RBP4.64□□□□□ -1.67
HDAC1-204ENST00000471488 GPR82Q96P67 336 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 TRGV9Q99603 122 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 LINC00467Q9BRT7 94 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 TMEM222Q9H0R3 208 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 GSN-AS1Q9NRJ2 163 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 U3KQ87 197 aa4.64□□□□□ -1.67
HDAC1-204ENST00000471488 LINC00854A0A1B0GVQ3 168 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 H3BTX0 84 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 LECT2O14960 151 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 OXTP01178 125 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 IGLV2-8P01709 118 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 CXCL3P19876 107 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 SRIP30626 198 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 GPX4P36969 197 aaPredicted RBP4.63□□□□□ -1.67
HDAC1-204ENST00000471488 LINC01620Q4KN68 170 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 STEAP1BQ6NZ63 245 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 IZUMO2Q6UXV1 221 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 ACOT7LQ6ZUV0 252 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 NEGR1Q7Z3B1 354 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 Q8N814 137 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 NRG4Q8WWG1 115 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 IL22RA2Q969J5 263 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 NAA60Q9H7X0 242 aa4.63□□□□□ -1.67
HDAC1-204ENST00000471488 MRPL16Q9NX20 251 aaKnown RBP4.63□□□□□ -1.67
HDAC1-204ENST00000471488 RCL1Q9Y2P8 373 aaKnown RBP4.63□□□□□ -1.67
HDAC1-204ENST00000471488 RNF213Q63HN8 5207 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 TRGV4A0A0C4DH28 118 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 ZNF324O75467 553 aaPredicted RBP4.62□□□□□ -1.67
HDAC1-204ENST00000471488 B3GALNT1O75752 331 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 CDS2O95674 445 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 CFDP00746 253 aaPredicted RBP4.62□□□□□ -1.67
HDAC1-204ENST00000471488 IL5P05113 134 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 RPL7P18124 248 aaKnown RBP4.62□□□□□ -1.67
HDAC1-204ENST00000471488 ASIPP42127 132 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 MRPL23Q16540 153 aaKnown RBP4.62□□□□□ -1.67
HDAC1-204ENST00000471488 FAAP20Q6NZ36 180 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 CROCCP3Q8IVE0 287 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 LINC00612Q8N6U2 182 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 LINC00469Q8N7U9 141 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 OR4D10Q8NGI6 311 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 OR4D5Q8NGN0 318 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 TERB2Q8NHR7 220 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 GLYATL2Q8WU03 294 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 DNAJC4Q9NNZ3 241 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 HHLA3Q9XRX5 114 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 HIGD1AQ9Y241 93 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 KLF12Q9Y4X4 402 aa4.62□□□□□ -1.67
HDAC1-204ENST00000471488 IGKV1OR2-108A0A075B7D4 117 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 PRAC2D3DTV9 90 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 H3BRN7 92 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 HPGDSO60760 199 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 RAB3DO95716 219 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 IGHV3-30P01768 117 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 IGHV3-33P01772 117 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 IGHV3-30-3P0DP02 117 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 IGHV3-30-5P0DP03 117 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 GYPEP15421 78 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 AKR1C4P17516 323 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 RPS19P39019 145 aaKnown RBP4.61□□□□□ -1.67
HDAC1-204ENST00000471488 LEPP41159 167 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 GABARAPL2P60520 117 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 SMCO1Q147U7 214 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 GPR107Q5VW38 600 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 TMEM182Q6ZP80 229 aaPredicted RBP4.61□□□□□ -1.67
HDAC1-204ENST00000471488 SCXQ7RTU7 201 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 LHFPL1Q86WI0 220 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 C10orf126Q8N4M7 172 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 NHLRC2Q8NBF2 726 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 C20orf144Q9BQM9 153 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 PRO0255Q9UI72 69 aa4.61□□□□□ -1.67
HDAC1-204ENST00000471488 TRAV5A0A0B4J249 113 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 TMEM238LA0A1B0GVL6 79 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 LRCOL1A6NCL2 159 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 PMS2P5A8MQ11 134 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 H3BP45 60 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 WRBO00258 174 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 RS1O15537 224 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 HYPMO75409 117 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 CCNKO75909 580 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 SFTA3P0C7M3 94 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 LINC00869P0C866 280 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 S100A1P23297 94 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 RNASE4P34096 147 aaKnown RBP4.6□□□□□ -1.67
HDAC1-204ENST00000471488 PPT1P50897 306 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 CCR6P51684 374 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 CRYBA4P53673 196 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 DAZ2Q13117 558 aaKnown RBP4.6□□□□□ -1.67
HDAC1-204ENST00000471488 SPCS2Q15005 226 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 AARDQ4LEZ3 155 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 SPANXN5Q5MJ07 72 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 LYZL2Q7Z4W2 148 aa4.6□□□□□ -1.67
HDAC1-204ENST00000471488 THAP8Q8NA92 274 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms