RNA–Protein interactions for RNA: ENST00000468402.1

HMGB1P25-201, Transcript of high mobility group box 1 pseudogene 25, humanhuman

BASIC

Gene HMGB1P25, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P25-201ENST00000468402 OR2M3Q8NG83 312 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR13C8Q8NGS7 320 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR4K13Q8NH42 304 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 THEM6Q8WUY1 208 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 SLC7A6Q92536 515 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 CYYR1Q96J86 154 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 ERMAPQ96PL5 475 aaPredicted RBP2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 OR2J1Q9GZK6 312 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 WDR61Q9GZS3 305 aaKnown RBP2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 GABARAPL1Q9H0R8 117 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 PLEKHF2Q9H8W4 249 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 GNG8Q9UK08 70 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 MUC3AQ02505 3323 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 YLPM1P49750 1951 aaKnown RBP2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 FRYQ5TBA9 3013 aa2.41□□□□□ -2.02
HMGB1P25-201ENST00000468402 INTS1Q8N201 2190 aaKnown RBP2.4□□□□□ -2.02
HMGB1P25-201ENST00000468402 TRAV36DV7A0A075B6V5 113 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGHV1-3A0A0C4DH29 117 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 LINC00862A6NCI5 91 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 LEUTXA8MZ59 168 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 J3QLW9 94 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 COX7A2LO14548 114 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 DLEU1O43261 78 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF207O43670 478 aaKnown RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 CDS2O95674 445 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 LTAP01374 205 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 IFNA10P01566 189 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 CCL3P10147 92 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 S100A4P26447 101 aaKnown RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 CNTFRP26992 372 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 ATP5G3P48201 142 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 RAB13P51153 203 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 DCDP81605 110 aaKnown RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 FOXF1Q12946 379 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR8B8Q15620 311 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGFBP7Q16270 282 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 LTC4SQ16873 150 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 LINC00483Q53H64 154 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 KIAA2026Q5HYC2 2103 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 LCE1FQ5T754 118 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 C12orf73Q69YU5 71 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 Q6ZR03 302 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 Q6ZS49 121 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 LRRC28Q86X40 367 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 C1orf174Q8IYL3 243 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 SAXO1Q8IYX7 474 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 TCTE3Q8IZS6 198 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 OR8I2Q8N0Y5 310 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 PACRGLQ8N7B6 248 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 UBALD1Q8TB05 177 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 RTN4IP1Q8WWV3 396 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 TOMM6Q96B49 74 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 STARD4Q96DR4 205 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 ADAT3Q96EY9 351 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 Q96M85 177 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 C12orf57Q99622 126 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 MND1Q9BWT6 205 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 NKX6-2Q9C056 277 aaPredicted RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 SND1-IT1Q9HBX3 110 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 SCN3BQ9NY72 215 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 TAAR3PQ9P1P4 343 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 U3KQ87 197 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 CNOT1A5YKK6 2376 aaKnown RBP2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 SPTBN2O15020 2390 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 TANC2Q9HCD6 1990 aa2.4□□□□□ -2.03
HMGB1P25-201ENST00000468402 DSPP15924 2871 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 PRRC2CQ9Y520 2896 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGKV1D-42A0A075B6H8 117 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGKV3D-11A0A0A0MRZ8 115 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 IGKV1D-43A0A0B4J1Z2 117 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 TRAV5A0A0B4J249 113 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 TMEM269A0A1B0GVZ9 245 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 A0A1B0GX51 115 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 C7orf66A4D0T2 115 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 DPRXA6NFQ7 191 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 TNFSF15O95150 251 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 NRASP01111 189 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 HRASP01112 189 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 KRASP01116 189 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 SRP19P09132 144 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 CD7P09564 240 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 LINC00869P0C866 280 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 BCL2P10415 239 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 COX6A1P12074 109 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 BLVRBP30043 206 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 COPZ1P61923 177 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 RPL18Q07020 188 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 MORN3Q6PF18 240 aaPredicted RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 ZNF283Q8N7M2 679 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 Q8N7P7 452 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 Q8N9L7 120 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 APCDD1LQ8NCL9 501 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 MRPL30Q8TCC3 161 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 RBPMSQ93062 196 aaKnown RBP2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 TP53RKQ96S44 253 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 AMELYQ99218 206 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 SPIN2AQ99865 258 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 SPIN2BQ9BPZ2 258 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 PDCD10Q9BUL8 212 aa2.39□□□□□ -2.03
HMGB1P25-201ENST00000468402 C1QTNF6Q9BXI9 259 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms