RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 A0A096LPI6 279 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 IGLV3-32A0A0A0MS00 114 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 TMEM238C9JI98 176 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 HIST1H2BKO60814 126 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 IGLV1-51P01701 117 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 HIST1H2BJP06899 126 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 COX7CP15954 63 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 EFNA4P52798 201 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 HBBP68871 147 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 EIF3IQ13347 325 aaKnown RBP0.52□□□□□ -2.33
SSB-207ENST00000465871 TRIQKQ629K1 86 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 HAGHLQ6PII5 290 aaPredicted RBP0.52□□□□□ -2.33
SSB-207ENST00000465871 FAM24BQ8N5W8 94 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 PLPP5Q8NEB5 264 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 NEK7Q8TDX7 302 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 HOPXQ9BPY8 73 aaPredicted RBP0.52□□□□□ -2.33
SSB-207ENST00000465871 UHRF1BP1Q6BDS2 1440 aa0.52□□□□□ -2.33
SSB-207ENST00000465871 TRAV27A0A087WT01 109 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 hDV103S1A0JD37 113 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 GPR31O00270 319 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 LYRM1O43325 122 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 ADGRB2O60241 1585 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 CST7O76096 145 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 PPYP01298 95 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 MT-ND6P03923 174 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 CSN2P05814 226 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 GNG10P50151 68 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 VBP1P61758 197 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 CHD3Q12873 2000 aaKnown RBP0.51□□□□□ -2.33
SSB-207ENST00000465871 CIRBPQ14011 172 aaKnown RBP0.51□□□□□ -2.33
SSB-207ENST00000465871 RTL8BQ17RB0 113 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 FKBP1CQ5VVH2 108 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 C1orf140Q5VVS0 124 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 C3orf33Q6P1S2 294 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 TMEM14EPQ6UXP3 125 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 GRINAQ7Z429 371 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 LYG2Q86SG7 212 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 OR5AS1Q8N127 324 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 Q8N6K4 173 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 PSMF1Q92530 271 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 RTL8AQ9BWD3 113 aa0.51□□□□□ -2.33
SSB-207ENST00000465871 ASCC3Q8N3C0 2202 aaKnown RBP0.5□□□□□ -2.33
SSB-207ENST00000465871 KIAA1549Q9HCM3 1950 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 CASP8AP2Q9UKL3 1982 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 CAMSAP1Q5T5Y3 1602 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 C9orf170A2RU37 121 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 E5RI56 91 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 C5orf67F2Z3F1 127 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 JMJD7-PLA2G4BH0Y9G9 81 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 NEFHP12036 1026 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 IDO1P14902 403 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 SERPINB1P30740 379 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 CRYBA4P53673 196 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 LTC4SQ16873 150 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 VMA21Q3ZAQ7 101 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 ARPINQ7Z6K5 226 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 ANGPTL5Q86XS5 388 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 FAM216BQ8N7L0 139 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 OR10AG1Q8NH19 301 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 BORCS8Q96FH0 119 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 ZC2HC1AQ96GY0 325 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 BIN3Q9NQY0 253 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 RNF11Q9Y3C5 154 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 ASB4Q9Y574 426 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 FREM3P0C091 2139 aa0.5□□□□□ -2.33
SSB-207ENST00000465871 MYO18AQ92614 2054 aaKnown RBP0.49□□□□□ -2.33
SSB-207ENST00000465871 MCM3APO60318 1980 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 A0A087WSZ3 146 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 TRAV5A0A0B4J249 113 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 MAP1LC3B2A6NCE7 125 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 H3BQV1 296 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 IGLV3-1P01715 115 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 FABP2P12104 132 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 RPL35P42766 123 aaKnown RBP0.49□□□□□ -2.33
SSB-207ENST00000465871 SPATA45Q537H7 98 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 KRTAP26-1Q6PEX3 210 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 DCUN1D2Q6PH85 259 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 SBSPONQ8IVN8 264 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 NUP35Q8NFH5 326 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 PLEKHB2Q96CS7 222 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 PRRT1Q99946 306 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 OR2H1Q9GZK4 316 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 TCEAL2Q9H3H9 227 aaPredicted RBP0.49□□□□□ -2.33
SSB-207ENST00000465871 OTORQ9NRC9 128 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 LAMTOR3Q9UHA4 124 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 TPRKBQ9Y3C4 175 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 MGAMO43451 1857 aa0.49□□□□□ -2.33
SSB-207ENST00000465871 CECR2Q9BXF3 1484 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 EIF3AQ14152 1382 aaKnown RBP0.48□□□□□ -2.33
SSB-207ENST00000465871 A0A1W2PPM0 123 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 C5orf58C9J3I9 102 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 PPP5D1E7EU14 171 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 KPNA4O00629 521 aaPredicted RBP0.48□□□□□ -2.33
SSB-207ENST00000465871 DIAPH2-AS1Q14236 149 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 CARD19Q96LW7 228 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 NAT8BQ9UHF3 227 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 E9PCH4 1651 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 NUP98P52948 1817 aa0.48□□□□□ -2.33
SSB-207ENST00000465871 CNTRLQ7Z7A1 2325 aa0.47□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.8 ms