RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 NCAPD3P42695 1498 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 CSN2P05814 226 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 CXCL1P09341 107 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 RAB5CP51148 216 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 GNG3P63215 75 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 RPL19P84098 196 aaKnown RBP0.56□□□□□ -2.32
SMC4-205ENST00000465563 TMEM14EPQ6UXP3 125 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 PHF5AQ7RTV0 110 aaKnown RBP0.56□□□□□ -2.32
SMC4-205ENST00000465563 PLPP5Q8NEB5 264 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 NUP35Q8NFH5 326 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 AP3S1Q92572 193 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 RAB37Q96AX2 223 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 MUCL1Q96DR8 90 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 ZHX1-C8orf76Q96EF9 292 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 HYLS1Q96M11 299 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 GGACTQ9BVM4 153 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 SSR3Q9UNL2 185 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 ANKRD31Q8N7Z5 1873 aa0.56□□□□□ -2.32
SMC4-205ENST00000465563 NUP210Q8TEM1 1887 aaPredicted RBP0.55□□□□□ -2.32
SMC4-205ENST00000465563 TRAV27A0A087WT01 109 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 TRAV5A0A0B4J249 113 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 RIIAD1A6NNX1 92 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 M0R233 179 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 PIAS1O75925 651 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 BASP1P80723 227 aaKnown RBP0.55□□□□□ -2.32
SMC4-205ENST00000465563 HAGHLQ6PII5 290 aaPredicted RBP0.55□□□□□ -2.32
SMC4-205ENST00000465563 OR5AS1Q8N127 324 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 SMIM20Q8N5G0 67 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 CDC26Q8NHZ8 85 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 CHCHD1Q96BP2 118 aaKnown RBP0.55□□□□□ -2.32
SMC4-205ENST00000465563 PRRT1Q99946 306 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 CACYBPQ9HB71 228 aaKnown RBP0.55□□□□□ -2.32
SMC4-205ENST00000465563 STOML2Q9UJZ1 356 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 PIK3C2AO00443 1686 aa0.55□□□□□ -2.32
SMC4-205ENST00000465563 TMEM238C9JI98 176 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 F8W1H4 67 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 K7ERJ3 54 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 COX7CP15954 63 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 OGNP20774 298 aaKnown RBP0.54□□□□□ -2.32
SMC4-205ENST00000465563 TMBIM6P55061 237 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 POU6F1Q14863 301 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 C1orf140Q5VVS0 124 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 ARPINQ7Z6K5 226 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 TMED4Q7Z7H5 227 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 GKN2Q86XP6 184 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 OR13C6PQ8NH95 151 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 PLEKHB2Q96CS7 222 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 MALSU1Q96EH3 234 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 CARD19Q96LW7 228 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 RTL8AQ9BWD3 113 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 RNF11Q9Y3C5 154 aa0.54□□□□□ -2.32
SMC4-205ENST00000465563 IGLV3-32A0A0A0MS00 114 aa0.53□□□□□ -2.32
SMC4-205ENST00000465563 ODAMA1E959 279 aa0.53□□□□□ -2.32
SMC4-205ENST00000465563 MSMO1Q15800 293 aa0.53□□□□□ -2.32
SMC4-205ENST00000465563 SNCBQ16143 134 aa0.53□□□□□ -2.32
SMC4-205ENST00000465563 HOPXQ9BPY8 73 aaPredicted RBP0.53□□□□□ -2.32
SMC4-205ENST00000465563 OR52A1Q9UKL2 312 aa0.53□□□□□ -2.32
SMC4-205ENST00000465563 UFC1Q9Y3C8 167 aa0.53□□□□□ -2.32
SMC4-205ENST00000465563 CAMSAP2Q08AD1 1489 aa0.53□□□□□ -2.33
SMC4-205ENST00000465563 A0A1W2PPM0 123 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 H3BRM9 83 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 IFNA14P01570 189 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 APOA2P02652 100 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 TAS2R41P59536 307 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 KLRD1Q13241 179 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 LTC4SQ16873 150 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 GLIPR1L1Q6UWM5 242 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 TEN1Q86WV5 123 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 OR10AG1Q8NH19 301 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 OR4K15Q8NH41 348 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 BOLA2Q9H3K6 86 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 TNFSF18Q9UNG2 199 aa0.52□□□□□ -2.33
SMC4-205ENST00000465563 hDV103S1A0JD37 113 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 OR2T8A6NH00 312 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 RER1O15258 196 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 HIST1H2BKO60814 126 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 HIST1H2BJP06899 126 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 LINC00575Q6W349 94 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 ZNF431Q8TF32 576 aaPredicted RBP0.51□□□□□ -2.33
SMC4-205ENST00000465563 PSMF1Q92530 271 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 ZNF714Q96N38 554 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 PBDC1Q9BVG4 233 aa0.51□□□□□ -2.33
SMC4-205ENST00000465563 ASH1LQ9NR48 2969 aaKnown RBP0.51□□□□□ -2.33
SMC4-205ENST00000465563 MDN1Q9NU22 5596 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 IFNA4P05014 189 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 IDO1P14902 403 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 GLRXP35754 106 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 CRYBA4P53673 196 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 HBBP68871 147 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 EIF3IQ13347 325 aaKnown RBP0.5□□□□□ -2.33
SMC4-205ENST00000465563 FKBP1CQ5VVH2 108 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 TMEM138Q9NPI0 162 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 GPR98Q8WXG9 6306 aa0.5□□□□□ -2.33
SMC4-205ENST00000465563 SYNMO15061 1565 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 ERBINQ96RT1 1412 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 RTL9Q8NET4 1388 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 C9orf170A2RU37 121 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 C5orf67F2Z3F1 127 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 JMJD7-PLA2G4BH0Y9G9 81 aa0.49□□□□□ -2.33
SMC4-205ENST00000465563 PRR15Q8IV56 129 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms