RNA–Protein interactions for RNA: ENST00000465073.6

USP42-205, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-205ENST00000465073 ZNRF2Q8NHG8 242 aa15.97■□□□□ 0.15
USP42-205ENST00000465073 TIMM8BQ9Y5J9 83 aaPredicted RBP15.97■□□□□ 0.15
USP42-205ENST00000465073 NBDYA0A0U1RRE5 68 aa15.97■□□□□ 0.15
USP42-205ENST00000465073 C16orf74Q96GX8 76 aa15.97■□□□□ 0.15
USP42-205ENST00000465073 ARL6Q9H0F7 186 aa15.97■□□□□ 0.15
USP42-205ENST00000465073 NDUFB6O95139 128 aa15.96■□□□□ 0.14
USP42-205ENST00000465073 ANXA7P20073 488 aaKnown RBP15.96■□□□□ 0.14
USP42-205ENST00000465073 CCL18P55774 89 aa15.96■□□□□ 0.14
USP42-205ENST00000465073 RRAS2P62070 204 aaPredicted RBP15.96■□□□□ 0.14
USP42-205ENST00000465073 PXDC1Q5TGL8 231 aa15.96■□□□□ 0.14
USP42-205ENST00000465073 TMEM14EPQ6UXP3 125 aa15.96■□□□□ 0.14
USP42-205ENST00000465073 PATE2Q6UY27 113 aa15.96■□□□□ 0.14
USP42-205ENST00000465073 ZNF493Q6ZR52 646 aa15.96■□□□□ 0.14
USP42-205ENST00000465073 OR10P1Q8NGE3 313 aa15.96■□□□□ 0.14
USP42-205ENST00000465073 RPUSD4Q96CM3 377 aaKnown RBP15.96■□□□□ 0.14
USP42-205ENST00000465073 METTL15P1P0C7V9 234 aa15.95■□□□□ 0.14
USP42-205ENST00000465073 HTN1P15515 57 aa15.95■□□□□ 0.14
USP42-205ENST00000465073 CDKN1BP46527 198 aa15.95■□□□□ 0.14
USP42-205ENST00000465073 TNP2Q05952 138 aa15.95■□□□□ 0.14
USP42-205ENST00000465073 TEPPQ6URK8 271 aa15.95■□□□□ 0.14
USP42-205ENST00000465073 MGAT4CQ9UBM8 478 aa15.95■□□□□ 0.14
USP42-205ENST00000465073 NAP1L6A6NFF2 107 aa15.94■□□□□ 0.14
USP42-205ENST00000465073 CCNKO75909 580 aa15.94■□□□□ 0.14
USP42-205ENST00000465073 CXCL2P19875 107 aa15.94■□□□□ 0.14
USP42-205ENST00000465073 C6orf223Q8N319 242 aa15.94■□□□□ 0.14
USP42-205ENST00000465073 ARV1Q9H2C2 271 aa15.94■□□□□ 0.14
USP42-205ENST00000465073 MRPS12O15235 138 aaKnown RBP15.93■□□□□ 0.14
USP42-205ENST00000465073 INPP1P49441 399 aa15.93■□□□□ 0.14
USP42-205ENST00000465073 TAS2R30P59541 319 aa15.93■□□□□ 0.14
USP42-205ENST00000465073 SPANXN2Q5MJ10 180 aa15.93■□□□□ 0.14
USP42-205ENST00000465073 GOSR2O14653 212 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 TSC22D2O75157 780 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 OR4E1P0C645 316 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 SLC38A11Q08AI6 406 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 LCN15Q6UWW0 184 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 ZNF546Q86UE3 836 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 RNASE8Q8TDE3 154 aaKnown RBP15.92■□□□□ 0.14
USP42-205ENST00000465073 TMEM263Q8WUH6 116 aaKnown RBP15.92■□□□□ 0.14
USP42-205ENST00000465073 C20orf144Q9BQM9 153 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 SRRQ9GZT4 340 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 ZNF331Q9NQX6 463 aaPredicted RBP15.92■□□□□ 0.14
USP42-205ENST00000465073 FLVCR2Q9UPI3 526 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 LINC00588Q9Y4M8 146 aa15.92■□□□□ 0.14
USP42-205ENST00000465073 CCDC160A6NGH7 325 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 C16orf90A8MZG2 172 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 H7BYZ3 331 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 RNF141Q8WVD5 230 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 SLC50A1Q9BRV3 221 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 NOP10Q9NPE3 64 aaKnown RBP15.91■□□□□ 0.14
USP42-205ENST00000465073 SCGB1D2O95969 90 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 CLINT1Q14677 625 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 IAH1Q2TAA2 248 aaPredicted RBP15.91■□□□□ 0.14
USP42-205ENST00000465073 LINC00305Q7Z4B0 112 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 OR10J6PQ8NGY7 276 aa15.91■□□□□ 0.14
USP42-205ENST00000465073 ABCA13Q86UQ4 5058 aa15.9■□□□□ 0.14
USP42-205ENST00000465073 C4orf46Q504U0 113 aa15.9■□□□□ 0.14
USP42-205ENST00000465073 BPIFA4PQ86YQ2 179 aa15.9■□□□□ 0.14
USP42-205ENST00000465073 GGACTQ9BVM4 153 aa15.9■□□□□ 0.14
USP42-205ENST00000465073 AGPAT2O15120 278 aa15.89■□□□□ 0.13
USP42-205ENST00000465073 PRB4P10163 310 aaPredicted RBP15.89■□□□□ 0.13
USP42-205ENST00000465073 TRIQKQ629K1 86 aa15.89■□□□□ 0.13
USP42-205ENST00000465073 KRTAP4-5Q9BYR2 181 aa15.89■□□□□ 0.13
USP42-205ENST00000465073 GSKIPQ9P0R6 139 aa15.89■□□□□ 0.13
USP42-205ENST00000465073 CDK2AP2O75956 126 aa15.88■□□□□ 0.13
USP42-205ENST00000465073 BAK1Q16611 211 aa15.88■□□□□ 0.13
USP42-205ENST00000465073 SSX7Q7RTT5 188 aa15.88■□□□□ 0.13
USP42-205ENST00000465073 CCDC28AQ8IWP9 274 aa15.88■□□□□ 0.13
USP42-205ENST00000465073 ZBTB8BQ8NAP8 495 aaPredicted RBP15.88■□□□□ 0.13
USP42-205ENST00000465073 RCL1Q9Y2P8 373 aaKnown RBP15.88■□□□□ 0.13
USP42-205ENST00000465073 COX7A2P2O60397 106 aa15.87■□□□□ 0.13
USP42-205ENST00000465073 ARL16Q0P5N6 197 aa15.87■□□□□ 0.13
USP42-205ENST00000465073 PXMP4Q9Y6I8 212 aa15.87■□□□□ 0.13
USP42-205ENST00000465073 SNRPCP09234 159 aaKnown RBP15.86■□□□□ 0.13
USP42-205ENST00000465073 LINC00612Q8N6U2 182 aa15.86■□□□□ 0.13
USP42-205ENST00000465073 GNPNAT1Q96EK6 184 aaPredicted RBP15.86■□□□□ 0.13
USP42-205ENST00000465073 ZNF503Q96F45 646 aa15.86■□□□□ 0.13
USP42-205ENST00000465073 Q9H8V8 135 aa15.86■□□□□ 0.13
USP42-205ENST00000465073 C7orf66A4D0T2 115 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 CENPXA8MT69 81 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 M6PRP20645 277 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 OR5I1Q13606 314 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 KIR3DS1Q14943 382 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 RXFP4Q8TDU9 374 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 MITD1Q8WV92 249 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 TMEM37Q8WXS4 190 aa15.85■□□□□ 0.13
USP42-205ENST00000465073 LINC00854A0A1B0GVQ3 168 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 MBPP02686 304 aaPredicted RBP15.84■□□□□ 0.13
USP42-205ENST00000465073 GFI1BQ5VTD9 330 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 C10orf113Q5VZT2 155 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 MGST2Q99735 147 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 TRAV26-1A0A087WT03 109 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 PRAC2D3DTV9 90 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 SLC17A3O00476 420 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 IGLC2P0DOY2 106 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 BTCP35070 178 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 OPCMLQ14982 345 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 CNPY1Q3B7I2 92 aa15.84■□□□□ 0.13
USP42-205ENST00000465073 PARD6GQ9BYG4 376 aaPredicted RBP15.84■□□□□ 0.13
USP42-205ENST00000465073 H3BTX0 84 aa15.83■□□□□ 0.12
USP42-205ENST00000465073 ZNF701M0R085 212 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms