RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 PKD1L1Q8TDX9 2849 aa10.78□□□□□ -0.68
COL6A1-202ENST00000463060 IZUMO1RA6ND01 250 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF785A8K8V0 405 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 TEX46H3BTG2 121 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF253O75346 499 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 CD33P20138 364 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 MEOX2P50222 304 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 RAB14P61106 215 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 PDE6HQ13956 83 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 C9orf66Q5T8R8 295 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 OR2K2Q8NGT1 345 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 MCRIP2Q9BUT9 160 aaKnown RBP10.77□□□□□ -0.69
COL6A1-202ENST00000463060 MS4A6AQ9H2W1 248 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 NRN1Q9NPD7 142 aa10.77□□□□□ -0.69
COL6A1-202ENST00000463060 TRAV2A0A0B4J234 112 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 TRAV8-2A0A0B4J237 113 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 H3BTX0 84 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 K7EQG2 157 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 SLC17A3O00476 420 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 ATF4P18848 351 aaPredicted RBP10.76□□□□□ -0.69
COL6A1-202ENST00000463060 DYNLRB2Q8TF09 96 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF331Q9NQX6 463 aaPredicted RBP10.76□□□□□ -0.69
COL6A1-202ENST00000463060 YTHDF2Q9Y5A9 579 aaKnown RBP10.76□□□□□ -0.69
COL6A1-202ENST00000463060 ARL2-SNX15V9GYD0 113 aa10.76□□□□□ -0.69
COL6A1-202ENST00000463060 NOTCH3Q9UM47 2321 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 A0A1W2PRE2 83 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 FAM74A7A6NL05 159 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 IGLL1P15814 213 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 PPT1P50897 306 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 PRR31Q5SQ13 230 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 LYPD1Q8N2G4 141 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 GBGT1Q8N5D6 347 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 BLNKQ8WV28 456 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 MED9Q9NWA0 146 aa10.75□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF256Q9Y2P7 627 aaPredicted RBP10.75□□□□□ -0.69
COL6A1-202ENST00000463060 RPL11P62913 178 aaKnown RBP10.74□□□□□ -0.69
COL6A1-202ENST00000463060 CCDC28AQ8IWP9 274 aa10.74□□□□□ -0.69
COL6A1-202ENST00000463060 SPAG8Q99932 426 aaPredicted RBP10.74□□□□□ -0.69
COL6A1-202ENST00000463060 GNG13Q9P2W3 67 aa10.74□□□□□ -0.69
COL6A1-202ENST00000463060 IGKV3-7A0A075B6H7 116 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 LINC00862A6NCI5 91 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 GGTLC3B5MD39 225 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 ISLRO14498 428 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 PAGE4O60829 102 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 RANP62826 216 aaKnown RBP10.73□□□□□ -0.69
COL6A1-202ENST00000463060 BEAN1Q3B7T3 259 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 RBPMS2Q6ZRY4 209 aaKnown RBP10.73□□□□□ -0.69
COL6A1-202ENST00000463060 IQCF2Q8IXL9 164 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 FAM24BQ8N5W8 94 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 FAM210AQ96ND0 272 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 SLC50A1Q9BRV3 221 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 Q9H3A6 140 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 MANBALQ9NQG1 85 aa10.73□□□□□ -0.69
COL6A1-202ENST00000463060 SORL1Q92673 2214 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 BCL2P10415 239 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 HLA-DMBP28068 263 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 UBE2G2P60604 165 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 SUMO1P63165 101 aaKnown RBP10.72□□□□□ -0.69
COL6A1-202ENST00000463060 PAFAH1B2P68402 229 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 PSG9Q00887 426 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 SAMD13Q5VXD3 122 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 IGFL4Q6B9Z1 124 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 LCN12Q6JVE5 192 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 EXOC3-AS1Q8N2X6 119 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 C20orf173Q96LM9 149 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 OTORQ9NRC9 128 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 CLEC5AQ9NY25 188 aa10.72□□□□□ -0.69
COL6A1-202ENST00000463060 LOC102723971A0A1B0GUV8 181 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 PGPA6NDG6 321 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 RBFOX3A6NFN3 312 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 DNASE2O00115 360 aaPredicted RBP10.71□□□□□ -0.69
COL6A1-202ENST00000463060 TAGLN2P37802 199 aaKnown RBP10.71□□□□□ -0.69
COL6A1-202ENST00000463060 ICAM4Q14773 271 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 PSG3Q16557 428 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 HAGHQ16775 308 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 ZNF506Q5JVG8 444 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 WFDC3Q8IUB2 231 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 ARL6IP6Q8N6S5 226 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 C16orf92Q96LL3 132 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 RARRES2Q99969 163 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 TXNDC17Q9BRA2 123 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 NKX6-2Q9C056 277 aaPredicted RBP10.71□□□□□ -0.69
COL6A1-202ENST00000463060 VAX2Q9UIW0 290 aa10.71□□□□□ -0.69
COL6A1-202ENST00000463060 IFNA1P01562 189 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 ATP5G3P48201 142 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 TFPI2P48307 235 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 CD81P60033 236 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 SRSF3P84103 164 aaKnown RBP10.7□□□□□ -0.7
COL6A1-202ENST00000463060 OXLD1Q5BKU9 147 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 RNF182Q8N6D2 247 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 MRPL53Q96EL3 112 aaKnown RBP10.7□□□□□ -0.7
COL6A1-202ENST00000463060 PRELID1Q9Y255 219 aa10.7□□□□□ -0.7
COL6A1-202ENST00000463060 DNAH3Q8TD57 4116 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 RAB19A4D1S5 217 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 M0R3E3 92 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 NDUFS6O75380 124 aaKnown RBP10.69□□□□□ -0.7
COL6A1-202ENST00000463060 ID1P41134 155 aa10.69□□□□□ -0.7
COL6A1-202ENST00000463060 MEF2BQ02080 365 aaPredicted RBP10.69□□□□□ -0.7
COL6A1-202ENST00000463060 EGFEM1PQ0D2K5 195 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms