RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 TM4SF20Q53R12 229 aa11.57□□□□□ -0.56
TMEM39A-203ENST00000461654 HELTA6NFD8 242 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 FAM74A7A6NL05 159 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 G3V4G9 280 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 CCL24O00175 119 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 PDE6DO43924 150 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 MEOX2P50222 304 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 SLURP1P55000 103 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 SRSF3P84103 164 aaKnown RBP11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 C16orf54Q6UWD8 224 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 RHPN1-AS1Q9BWJ2 59 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 SLC35B3Q9H1N7 401 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 SMPXQ9UHP9 88 aa11.56□□□□□ -0.56
TMEM39A-203ENST00000461654 KRBOX1C9JBD0 128 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 F6UZH7 168 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 NDUFS6O75380 124 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 APOHP02749 345 aaPredicted RBP11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 IGLC2P0DOY2 106 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 S100A1P23297 94 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 RANP62826 216 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 PDE6HQ13956 83 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 SIGLEC15Q6ZMC9 328 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 RAX2Q96IS3 184 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 DUX3Q96PT4 197 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 ZNF586Q9NXT0 402 aa11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 YTHDF2Q9Y5A9 579 aaKnown RBP11.55□□□□□ -0.56
TMEM39A-203ENST00000461654 TRBV19A0A075B6N1 114 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 H3BQ15 152 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 MRPS12O15235 138 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 SNRPCP09234 159 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 SFTA3P0C7M3 94 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 MYCNOSP40205 109 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 CEBPGP53567 150 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 RPL11P62913 178 aaKnown RBP11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 PSG9Q00887 426 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 LYPD1Q8N2G4 141 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 AAMDCQ9H7C9 122 aa11.54□□□□□ -0.56
TMEM39A-203ENST00000461654 NOTCH1P46531 2555 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 A0A087X0K7 114 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 TMEM213A2RRL7 107 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 TMEM218A2RU14 115 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 TMEM250H0YL14 139 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 H3BTX0 84 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 CHEK1O14757 476 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 SRP19P09132 144 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 ATP5G3P48201 142 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 SUMO1P63165 101 aaKnown RBP11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 FHL3Q13643 280 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 OR9G4Q8NGQ1 327 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 GLMPQ8WWB7 406 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 DLX4Q92988 240 aaPredicted RBP11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 TCEAL7Q9BRU2 100 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 CMYA5Q8N3K9 4069 aa11.53□□□□□ -0.56
TMEM39A-203ENST00000461654 C2orf70A6NJV1 201 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 F8W036 122 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 ZNF253O75346 499 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 CBLN1P23435 193 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 CD81P60033 236 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 SOHLH1Q5JUK2 328 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 CMTM2Q8TAZ6 248 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 Q9H3A6 140 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 OTORQ9NRC9 128 aa11.52□□□□□ -0.57
TMEM39A-203ENST00000461654 PGPA6NDG6 321 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 OVOL1O14753 267 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 SLC25A5P05141 298 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 FOLR2P14207 255 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 OXLD1Q5BKU9 147 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 SAMD13Q5VXD3 122 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 TCF24Q7RTU0 167 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 CYB561D1Q8N8Q1 229 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 RPUSD4Q96CM3 377 aaKnown RBP11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 SLC50A1Q9BRV3 221 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 SMAD5-AS1Q9Y6J3 95 aa11.51□□□□□ -0.57
TMEM39A-203ENST00000461654 GGTLC3B5MD39 225 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 C9JQL5 133 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 PF4P02776 101 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 CSN1S1P47710 185 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 C5orf17Q8NAS9 161 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 DYNLRB2Q8TF09 96 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 C17orf77Q96MU5 243 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 SEC11CQ9BY50 192 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 CLEC5AQ9NY25 188 aa11.5□□□□□ -0.57
TMEM39A-203ENST00000461654 NDUFB4O95168 129 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 CD33P20138 364 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 CCDC28AQ8IWP9 274 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 HIST1H2BAQ96A08 127 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 NRN1Q9NPD7 142 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 PRELID1Q9Y255 219 aa11.49□□□□□ -0.57
TMEM39A-203ENST00000461654 K7EQM0 130 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 SLC17A3O00476 420 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 PAFAH1B2P68402 229 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 ZNF674Q2M3X9 581 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 EXOC3-AS1Q8N2X6 119 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 C11orf52Q96A22 123 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 C16orf92Q96LL3 132 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 LINC00052Q96N35 136 aa11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 ZNF331Q9NQX6 463 aaPredicted RBP11.48□□□□□ -0.57
TMEM39A-203ENST00000461654 EPDR1Q9UM22 224 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 142.4 ms