RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 MRPS12O15235 138 aaKnown RBP16.13■□□□□ 0.17
PTPN4-207ENST00000460162 MBPP02686 304 aaPredicted RBP16.13■□□□□ 0.17
PTPN4-207ENST00000460162 PSG3Q16557 428 aa16.13■□□□□ 0.17
PTPN4-207ENST00000460162 RNF212Q495C1 297 aa16.13■□□□□ 0.17
PTPN4-207ENST00000460162 LCN15Q6UWW0 184 aa16.13■□□□□ 0.17
PTPN4-207ENST00000460162 TMEM256Q8N2U0 113 aa16.13■□□□□ 0.17
PTPN4-207ENST00000460162 LRRC20Q8TCA0 184 aa16.13■□□□□ 0.17
PTPN4-207ENST00000460162 KIAA1109Q2LD37 5005 aa16.13■□□□□ 0.17
PTPN4-207ENST00000460162 ZNF705GA8MUZ8 300 aaPredicted RBP16.12■□□□□ 0.17
PTPN4-207ENST00000460162 AGPAT2O15120 278 aa16.12■□□□□ 0.17
PTPN4-207ENST00000460162 ZNF846Q147U1 533 aa16.12■□□□□ 0.17
PTPN4-207ENST00000460162 TMEM88Q6PEY1 159 aa16.12■□□□□ 0.17
PTPN4-207ENST00000460162 SLC50A1Q9BRV3 221 aa16.12■□□□□ 0.17
PTPN4-207ENST00000460162 DNAH17Q9UFH2 4485 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 TRAV12-2A0A075B6T6 113 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 A0A1B0GVY2 172 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 M0R2N4 97 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 LYRM1O43325 122 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 RHOBP62745 196 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 ARL16Q0P5N6 197 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 LINC00305Q7Z4B0 112 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 C15orf53Q8NAA6 179 aa16.11■□□□□ 0.17
PTPN4-207ENST00000460162 NACAE9PAV3 2078 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 PKHD1P08F94 4074 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 L7N2F9 121 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 CCSO14618 274 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 RTL8CO15255 209 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 PLA2G10O15496 165 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 VAMP2P63027 116 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 RPUSD4Q96CM3 377 aaKnown RBP16.1■□□□□ 0.17
PTPN4-207ENST00000460162 MGST2Q99735 147 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 ZNF331Q9NQX6 463 aaPredicted RBP16.1■□□□□ 0.17
PTPN4-207ENST00000460162 PPP1R14DQ9NXH3 145 aa16.1■□□□□ 0.17
PTPN4-207ENST00000460162 PLAC8L1A1L4L8 177 aa16.09■□□□□ 0.17
PTPN4-207ENST00000460162 COX7A2P2O60397 106 aa16.09■□□□□ 0.17
PTPN4-207ENST00000460162 BPIFA4PQ86YQ2 179 aa16.09■□□□□ 0.17
PTPN4-207ENST00000460162 PRSS29PA6NIE9 313 aa16.08■□□□□ 0.16
PTPN4-207ENST00000460162 TCRBP04435 133 aa16.08■□□□□ 0.16
PTPN4-207ENST00000460162 PRM2P04554 102 aa16.08■□□□□ 0.16
PTPN4-207ENST00000460162 CDKN1BP46527 198 aa16.08■□□□□ 0.16
PTPN4-207ENST00000460162 TAS2R60P59551 318 aa16.08■□□□□ 0.16
PTPN4-207ENST00000460162 Q6ZR54 194 aa16.08■□□□□ 0.16
PTPN4-207ENST00000460162 LSM5Q9Y4Y9 91 aaKnown RBP16.08■□□□□ 0.16
PTPN4-207ENST00000460162 IGLV2-18A0A075B6J9 118 aa16.07■□□□□ 0.16
PTPN4-207ENST00000460162 ZNF431Q8TF32 576 aaPredicted RBP16.07■□□□□ 0.16
PTPN4-207ENST00000460162 TMEM37Q8WXS4 190 aa16.07■□□□□ 0.16
PTPN4-207ENST00000460162 C16orf74Q96GX8 76 aa16.07■□□□□ 0.16
PTPN4-207ENST00000460162 LINC01587Q99440 93 aa16.07■□□□□ 0.16
PTPN4-207ENST00000460162 NUDT15Q9NV35 164 aa16.07■□□□□ 0.16
PTPN4-207ENST00000460162 FAM25EA8MYX2 175 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 DEFB130BP0DP73 79 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 DEFB130AP0DP74 79 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 AZU1P20160 251 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 CAMLGP49069 296 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 CAV2P51636 162 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 FAM3BP58499 235 aaPredicted RBP16.06■□□□□ 0.16
PTPN4-207ENST00000460162 RAB31Q13636 194 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 C10orf113Q5VZT2 155 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 C20orf144Q9BQM9 153 aa16.06■□□□□ 0.16
PTPN4-207ENST00000460162 TRAV6A0A075B6T7 132 aa16.05■□□□□ 0.16
PTPN4-207ENST00000460162 BCAP31P51572 246 aa16.05■□□□□ 0.16
PTPN4-207ENST00000460162 OPCMLQ14982 345 aa16.05■□□□□ 0.16
PTPN4-207ENST00000460162 C11orf1Q9H5F2 150 aa16.05■□□□□ 0.16
PTPN4-207ENST00000460162 NDUFA13Q9P0J0 144 aa16.05■□□□□ 0.16
PTPN4-207ENST00000460162 PXMP4Q9Y6I8 212 aa16.05■□□□□ 0.16
PTPN4-207ENST00000460162 C5orf51A6NDU8 294 aa16.04■□□□□ 0.16
PTPN4-207ENST00000460162 SLC17A3O00476 420 aa16.04■□□□□ 0.16
PTPN4-207ENST00000460162 ATP5G1P05496 136 aa16.04■□□□□ 0.16
PTPN4-207ENST00000460162 IGLC2P0DOY2 106 aa16.04■□□□□ 0.16
PTPN4-207ENST00000460162 PVALBP20472 110 aaPredicted RBP16.04■□□□□ 0.16
PTPN4-207ENST00000460162 ATP5G3P48201 142 aa16.04■□□□□ 0.16
PTPN4-207ENST00000460162 MORN5Q5VZ52 161 aa16.04■□□□□ 0.16
PTPN4-207ENST00000460162 Q6ZRG5 221 aa16.04■□□□□ 0.16
PTPN4-207ENST00000460162 TMEM263Q8WUH6 116 aaKnown RBP16.04■□□□□ 0.16
PTPN4-207ENST00000460162 H7BYZ3 331 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 VWC2Q2TAL6 325 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 SOHLH1Q5JUK2 328 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 ZNF493Q6ZR52 646 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 NRARPQ7Z6K4 114 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 C12orf45Q8N5I9 185 aaPredicted RBP16.03■□□□□ 0.16
PTPN4-207ENST00000460162 OR10J6PQ8NGY7 276 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 RNASE8Q8TDE3 154 aaKnown RBP16.03■□□□□ 0.16
PTPN4-207ENST00000460162 C2orf50Q96LR7 162 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 SEC22CQ9BRL7 303 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 CCDC32Q9BV29 185 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 UQCC1Q9NVA1 299 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 WDR83OSQ9Y284 106 aa16.03■□□□□ 0.16
PTPN4-207ENST00000460162 TIMM8BQ9Y5J9 83 aaPredicted RBP16.03■□□□□ 0.16
PTPN4-207ENST00000460162 PCLOQ9Y6V0 5065 aa16.02■□□□□ 0.16
PTPN4-207ENST00000460162 CST7O76096 145 aa16.02■□□□□ 0.16
PTPN4-207ENST00000460162 SNRPCP09234 159 aaKnown RBP16.02■□□□□ 0.16
PTPN4-207ENST00000460162 PRB4P10163 310 aaPredicted RBP16.02■□□□□ 0.16
PTPN4-207ENST00000460162 OR1L4Q8NGR5 311 aa16.02■□□□□ 0.16
PTPN4-207ENST00000460162 PFDN5Q99471 154 aa16.02■□□□□ 0.16
PTPN4-207ENST00000460162 KRTAP17-1Q9BYP8 105 aa16.02■□□□□ 0.16
PTPN4-207ENST00000460162 LYRM2Q9NU23 88 aaPredicted RBP16.02■□□□□ 0.16
PTPN4-207ENST00000460162 CBY3A6NI87 242 aa16.01■□□□□ 0.15
PTPN4-207ENST00000460162 F5H768 121 aa16.01■□□□□ 0.15
PTPN4-207ENST00000460162 HTN1P15515 57 aa16.01■□□□□ 0.15
PTPN4-207ENST00000460162 GUK1Q16774 197 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms