RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 DEFB1P60022 68 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 B2MP61769 119 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 RBMY1FQ15415 496 aaKnown RBP12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 LRRC37A5PQ49AS3 106 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 ZNF705AQ6ZN79 300 aaPredicted RBP12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 ZNF709Q8N972 641 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 C2CD4CQ8TF44 421 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 LINC00476Q8WZB0 136 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 C17orf77Q96MU5 243 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 KCNIP2Q9NS61 270 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 SLC39A9Q9NUM3 307 aa12.68□□□□□ -0.38
SCARNA2-201ENST00000458748 TRAV8-2A0A0B4J237 113 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 TEX48A0A1B0GUV7 120 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 CXCL3P19876 107 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 PRR20EP86478 221 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 PRR20CP86479 221 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 PRR20DP86480 221 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 PRR20BP86481 221 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 PRR20AP86496 221 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 PSG3Q16557 428 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 GUK1Q16774 197 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 MIC13Q5XKP0 118 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 TMEM37Q8WXS4 190 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 TMEM208Q9BTX3 173 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 SLC35B3Q9H1N7 401 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 RFNGQ9Y644 331 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 PXMP4Q9Y6I8 212 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 HYDINQ4G0P3 5121 aa12.67□□□□□ -0.38
SCARNA2-201ENST00000458748 IGHV3OR16-12A0A075B7B8 117 aa12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 ZNF705FA8MVS1 300 aaPredicted RBP12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 ZNF705DP0CH99 300 aaPredicted RBP12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 ZNF705BP0CI00 300 aaPredicted RBP12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 CNN1P51911 297 aaKnown RBP12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 OPCMLQ14982 345 aa12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 OR5C1Q8NGR4 320 aa12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 PPP1R1CQ8WVI7 109 aa12.66□□□□□ -0.38
SCARNA2-201ENST00000458748 TRAV10A0A0B4J240 114 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 A8MTW9 85 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 LY6G6CO95867 125 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 INSP01308 110 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 HBE1P02100 147 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 HLA-DMBP28068 263 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 RHOBP62745 196 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 HIST1H1AQ02539 215 aaPredicted RBP12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 IGFL4Q6B9Z1 124 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 IGF2BP2-AS1Q96M15 143 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 NPCDR1Q9BY65 106 aa12.65□□□□□ -0.38
SCARNA2-201ENST00000458748 PLECQ15149 4684 aaKnown RBP12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 ALMS1Q8TCU4 4167 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 C17orf112F2Z3M2 114 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 MRPS12O15235 138 aaKnown RBP12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 PTTG1O95997 202 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 SPART-AS1P0CW21 52 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 H2BFSP57053 126 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 NHLH2Q02577 135 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 OR8A1Q8NGG7 326 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 RPUSD4Q96CM3 377 aaKnown RBP12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 ZNF331Q9NQX6 463 aaPredicted RBP12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 OR5AC2Q9NZP5 309 aa12.64□□□□□ -0.39
SCARNA2-201ENST00000458748 BOLA2-SMG1P6H3BVE0 249 aa12.63□□□□□ -0.39
SCARNA2-201ENST00000458748 RRN3P1Q2M238 152 aa12.63□□□□□ -0.39
SCARNA2-201ENST00000458748 OR11H7Q8NGC8 314 aa12.63□□□□□ -0.39
SCARNA2-201ENST00000458748 MPC2O95563 127 aa12.62□□□□□ -0.39
SCARNA2-201ENST00000458748 IGLC2P0DOY2 106 aa12.62□□□□□ -0.39
SCARNA2-201ENST00000458748 CLINT1Q14677 625 aa12.62□□□□□ -0.39
SCARNA2-201ENST00000458748 AMTNQ6UX39 209 aa12.62□□□□□ -0.39
SCARNA2-201ENST00000458748 OR10J6PQ8NGY7 276 aa12.62□□□□□ -0.39
SCARNA2-201ENST00000458748 ZNF253O75346 499 aa12.61□□□□□ -0.39
SCARNA2-201ENST00000458748 EMP1P54849 157 aa12.61□□□□□ -0.39
SCARNA2-201ENST00000458748 SPINK13Q1W4C9 94 aa12.61□□□□□ -0.39
SCARNA2-201ENST00000458748 THAP6Q8TBB0 222 aa12.61□□□□□ -0.39
SCARNA2-201ENST00000458748 TMEM14CQ9P0S9 112 aa12.61□□□□□ -0.39
SCARNA2-201ENST00000458748 LOC102723971A0A1B0GUV8 181 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 IGLL5B9A064 214 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 H0YIZ8 118 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 M0R2Z0 102 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 IFNA5P01569 189 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 TSPOP30536 169 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 LGALS9CQ6DKI2 356 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 Q6ZTC4 211 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 TMEM256Q8N2U0 113 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 ATP5SQ99766 215 aa12.6□□□□□ -0.39
SCARNA2-201ENST00000458748 TRAV5A0A0B4J249 113 aa12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 RPL12P30050 165 aaKnown RBP12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 PDE6HQ13956 83 aa12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 MORN5Q5VZ52 161 aa12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 C1orf158Q8N1D5 194 aa12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 SCGB1C1Q8TD33 95 aa12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 WDR61Q9GZS3 305 aaKnown RBP12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 TIMM9Q9Y5J7 89 aa12.59□□□□□ -0.39
SCARNA2-201ENST00000458748 DEFB131BA0A096LNP1 70 aa12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 H3BQ15 152 aa12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 SNRPCP09234 159 aaKnown RBP12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 HIST1H1EP10412 219 aaKnown RBP12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 CDKN1BP46527 198 aa12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 C12orf74Q32Q52 190 aa12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 SAT2Q96F10 170 aaPredicted RBP12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 RNF126Q9BV68 326 aa12.58□□□□□ -0.4
SCARNA2-201ENST00000458748 MRPL32Q9BYC8 188 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms