RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 LINC00242Q5T6M2 205 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 TEX261Q6UWH6 196 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 STPG2Q8N412 459 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 TEX29Q8N6K0 151 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 C5orf56Q8N8D9 126 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 UBAC2Q8NBM4 344 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 NECAP1Q8NC96 275 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR5C1Q8NGR4 320 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 STOML3Q8TAV4 291 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 SRSF12Q8WXF0 261 aaKnown RBP3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 C22orf15Q8WYQ4 148 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 RASL11BQ9BPW5 248 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 ZNF471Q9BX82 626 aaPredicted RBP3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 SMIM3Q9BZL3 60 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 ARV1Q9H2C2 271 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 COX11Q9Y6N1 276 aa3.98□□□□□ -1.77
HMGB1P4-201ENST00000455362 C2CD3Q4AC94 2353 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 BORCS7-ASMTA0A0B4J1R7 106 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 IGHV7-81A0A0B4J1V7 117 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 A0A1B0GV90 55 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 PRAC2D3DTV9 90 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 FGF16O43320 207 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 LY6G6DO95868 133 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 IFNA7P01567 189 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 HBE1P02100 147 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 IFNA4P05014 189 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 REG1AP05451 166 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR8U8P0C7N1 319 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 APELAP0DMC3 54 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 NPY1RP25929 384 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 TFPI2P48307 235 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 SUB1P53999 127 aaKnown RBP eCLIP3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 UBA52P62987 128 aaKnown RBP3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 EIF5AP63241 154 aaKnown RBP3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 NDPQ00604 133 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 LY6EQ16553 131 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 SPNS3Q6ZMD2 512 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 C16orf82Q7Z2V1 217 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 HSD17B13Q7Z5P4 300 aaPredicted RBP3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 BAP18Q8IXM2 172 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 BOD1L2Q8IYS8 172 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR10P1Q8NGE3 313 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 OR5B12Q96R08 314 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 P2RX4Q99571 388 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 HSPB9Q9BQS6 159 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 GINS3Q9BRX5 216 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 GGACTQ9BVM4 153 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 NAGKQ9UJ70 344 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 MOB4Q9Y3A3 225 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 ATRQ13535 2644 aa3.97□□□□□ -1.77
HMGB1P4-201ENST00000455362 LOC100131303A0A0U1RQF7 123 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 TMEM213A2RRL7 107 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 E9PLD3 99 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 M0QZK8 103 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 IFNA5P01569 189 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 FABP1P07148 127 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 TPT1P13693 172 aaKnown RBP3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 MDKP21741 143 aaPredicted RBP3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 G0S2P27469 103 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 SRP14P37108 136 aaKnown RBP3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 MEOX2P50222 304 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 BLCAPP62952 87 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF266Q14584 549 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 ALKAL2Q6UX46 152 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 LINC00336Q6ZUF6 198 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF767PQ75MW2 155 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 TTC9CQ8N5M4 171 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 SIGLECL1Q8N7X8 197 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 HSD17B11Q8NBQ5 300 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 LFNGQ8NES3 379 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 OR1P1Q8NH06 330 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 SGMS2Q8NHU3 365 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 MRAPQ8TCY5 172 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 SCGB1C1Q8TD33 95 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 RNASEH2CQ8TDP1 164 aaKnown RBP3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 ARPC1AQ92747 370 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 PHYHIPLQ96FC7 376 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 C9orf85Q96MD7 179 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 SMR3AQ99954 134 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 FAM103A1Q9BTL3 118 aaKnown RBP3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 TMEM147Q9BVK8 224 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 UQCC1Q9NVA1 299 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 GOLT1BQ9Y3E0 138 aa3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 F11RQ9Y624 299 aaKnown RBP3.96□□□□□ -1.78
HMGB1P4-201ENST00000455362 TEX48A0A1B0GUV7 120 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 LYRM9A8MSI8 78 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 FNDC10F2Z333 226 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 NXPH4O95158 308 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 BRI3O95415 125 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 IGHG2P01859 326 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 SEC11BP0C7V7 166 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 CD99P14209 185 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 ATP6V0CP27449 155 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 CRIP2P52943 208 aaPredicted RBP3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 SLC35B1P78383 322 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 KLK9Q2XQG4 91 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 AKIRIN2Q53H80 203 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 EIF5AL1Q6IS14 154 aaKnown RBP3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 TMEM86BQ8N661 226 aa3.95□□□□□ -1.78
HMGB1P4-201ENST00000455362 ZNF491Q8N8L2 437 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms