RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 TMEM14CQ9P0S9 112 aa5.64□□□□□ -1.51
AC004540.1-206ENST00000448056 NOTCH1P46531 2555 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 A0A087X0K7 114 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 LOC100996750A0A140TA64 210 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 H3BQ15 152 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 EIF3GO75821 320 aaKnown RBP eCLIP5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 SNRPCP09234 159 aaKnown RBP5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 CD7P09564 240 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 IGLC2P0DOY2 106 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 HIST1H1EP10412 219 aaKnown RBP5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 CDC34P49427 236 aaPredicted RBP5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 CMC4P56277 68 aaPredicted RBP5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 TAS2R45P59539 299 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 Q8N1Y9 231 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 ZNF503Q96F45 646 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 PRR25Q96S07 402 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 PAXXQ9BUH6 204 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 KRTAP4-6Q9BYQ5 205 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 OR51M1Q9H341 326 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 HRH4Q9H3N8 390 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 ZNF586Q9NXT0 402 aa5.63□□□□□ -1.51
AC004540.1-206ENST00000448056 TRBV19A0A075B6N1 114 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 SOCS3O14543 225 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 HMGB3O15347 200 aaKnown RBP5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 PRB2P02812 416 aaPredicted RBP5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 OR10J4P0C629 311 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 NBEAP1P0C6P0 100 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 STAG3L2P0CL84 134 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 STAG3L3P0CL85 134 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 PYYP10082 97 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 ID1P41134 155 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 FHITP49789 147 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 MEOX2P50222 304 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 RAB5CP51148 216 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 CD81P60033 236 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 ZNF726P1Q15940 193 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 GUK1Q16774 197 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 KHDC3LQ587J8 217 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 SAMD13Q5VXD3 122 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 DPPA3Q6W0C5 159 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 PQLC2Q6ZP29 291 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 SSX7Q7RTT5 188 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 GTSCR1Q86UQ5 136 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 FAM24BQ8N5W8 94 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 FXYD5Q96DB9 178 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 SAT2Q96F10 170 aaPredicted RBP5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 PHYHIPLQ96FC7 376 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 C16orf92Q96LL3 132 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 SORL1Q92673 2214 aa5.62□□□□□ -1.51
AC004540.1-206ENST00000448056 TRAV8-2A0A0B4J237 113 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 CTXND1A0A1B0GTU2 59 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 OR11H12B2RN74 326 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 H3BTX0 84 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 ISLRO14498 428 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 OR7C2O60412 319 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 NDUFB4O95168 129 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 CXorf1O96002 111 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 ZNF688P0C7X2 276 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 ARL14EPLP0DKL9 152 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 PSMB3P49720 205 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 SULT1A2P50226 295 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 SNRPD3P62318 126 aaKnown RBP5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 ODF3L2Q3SX64 289 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 IGFL4Q6B9Z1 124 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 FAM213BQ8TBF2 198 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 SUN5Q8TC36 379 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 LRRC20Q8TCA0 184 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 BLNKQ8WV28 456 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 MBD3L1Q8WWY6 194 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 LINC00052Q96N35 136 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 FAM110AQ9BQ89 295 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 ZNF331Q9NQX6 463 aaPredicted RBP5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 AURKAIP1Q9NWT8 199 aaPredicted RBP5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 UBQLN2Q9UHD9 624 aa5.61□□□□□ -1.51
AC004540.1-206ENST00000448056 SLC17A3O00476 420 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 ZNF253O75346 499 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 GCHFRP30047 84 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 DEFB131AP59861 70 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 UBE2L3P68036 154 aaKnown RBP5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 PSG9Q00887 426 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 PDE6HQ13956 83 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 PSMG4Q5JS54 123 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 FAM74A1Q5RGS3 127 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 XP32Q5T750 250 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 LCN15Q6UWW0 184 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 ALKAL2Q6UX46 152 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 APRG1Q8IVJ8 170 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 DEFB125Q8N687 156 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 RNF182Q8N6D2 247 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 SFT2D1Q8WV19 159 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 C20orf173Q96LM9 149 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 SLC50A1Q9BRV3 221 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 MAP6D1Q9H9H5 199 aa5.6□□□□□ -1.51
AC004540.1-206ENST00000448056 TRAV1-1A0A0B4J248 108 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 MAP1LC3B2A6NCE7 125 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 K7EIL1 84 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 IGHV4-30-4P0DP06 118 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 HLA-DMBP28068 263 aa5.59□□□□□ -1.51
AC004540.1-206ENST00000448056 FGF8P55075 233 aaPredicted RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms