RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 PAPPA-AS1Q5QFB9 102 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 FAM74A4Q5TZK3 123 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 DKK4Q9UBT3 224 aa13.36□□□□□ -0.27
TCOF1-206ENST00000445265 KIR2DL5BA0A0G2JN68 375 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 KIR2DL5BA0A0G2JPC4 375 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 H3BVH4 76 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 ZNF562Q6V9R5 426 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 KIR2DL5AQ8N109 375 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 TPSG1Q9NRR2 321 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 ZNF56Q15929 161 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 A0A1W2PNU3 283 aaPredicted RBP13.35□□□□□ -0.27
TCOF1-206ENST00000445265 MED12LQ86YW9 2145 aa13.35□□□□□ -0.27
TCOF1-206ENST00000445265 NCR2O95944 276 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 UBE2V1Q13404 147 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 LRP4O75096 1905 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 WIPF2Q8TF74 440 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-206ENST00000445265 FAM168AQ92567 244 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 SH2D7A6NKC9 451 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-206ENST00000445265 JKAMPQ9P055 326 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 MED13LQ71F56 2210 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 IGKCP01834 107 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 PAX8Q06710 450 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 DIAPH2-AS1Q14236 149 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 ORMDL2Q53FV1 153 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 DMRTC2Q8IXT2 367 aaPredicted RBP13.34□□□□□ -0.27
TCOF1-206ENST00000445265 CCL19Q99731 98 aa13.34□□□□□ -0.27
TCOF1-206ENST00000445265 EVI2AP22794 236 aa13.33□□□□□ -0.27
TCOF1-206ENST00000445265 Q8TAT8 98 aa13.33□□□□□ -0.27
TCOF1-206ENST00000445265 EML6Q6ZMW3 1958 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 GUSBP1Q15486 140 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 RAXQ9Y2V3 346 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 AMN1Q8IY45 258 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 RCHY1Q96PM5 261 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 TECTAO75443 2155 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 KMT2EQ8IZD2 1858 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 CR1LQ2VPA4 569 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 SPRNQ5BIV9 151 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 OR2K2Q8NGT1 345 aa13.33□□□□□ -0.28
TCOF1-206ENST00000445265 IGLC1P0CG04 106 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 LDLRAD2Q5SZI1 272 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 AMMECR1LQ6DCA0 310 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 HAX1O00165 279 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 OVOL1O14753 267 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 NDUFA3O95167 84 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 IGHV3-11P01762 117 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 WT1P19544 449 aaPredicted RBP13.32□□□□□ -0.28
TCOF1-206ENST00000445265 RNASE4P34096 147 aaKnown RBP13.32□□□□□ -0.28
TCOF1-206ENST00000445265 SIGLEC15Q6ZMC9 328 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 CEACAM4O75871 244 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 TMEM170BQ5T4T1 132 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 COX11Q9Y6N1 276 aa13.32□□□□□ -0.28
TCOF1-206ENST00000445265 EFNA4P52798 201 aa13.31□□□□□ -0.28
TCOF1-206ENST00000445265 OR5A1Q8NGJ0 315 aa13.31□□□□□ -0.28
TCOF1-206ENST00000445265 CREBBPQ92793 2442 aa13.31□□□□□ -0.28
TCOF1-206ENST00000445265 A0A087X0K7 114 aa13.31□□□□□ -0.28
TCOF1-206ENST00000445265 IGLC7A0M8Q6 106 aa13.31□□□□□ -0.28
TCOF1-206ENST00000445265 TRAV41A0A0B4J266 112 aa13.31□□□□□ -0.28
TCOF1-206ENST00000445265 IFI27P40305 119 aaPredicted RBP13.31□□□□□ -0.28
TCOF1-206ENST00000445265 C7orf69Q9H7B7 122 aa13.31□□□□□ -0.28
TCOF1-206ENST00000445265 SMAGPQ0VAQ4 97 aa13.3□□□□□ -0.28
TCOF1-206ENST00000445265 NHP2Q9NX24 153 aaKnown RBP13.3□□□□□ -0.28
TCOF1-206ENST00000445265 MOB4Q9Y3A3 225 aa13.3□□□□□ -0.28
TCOF1-206ENST00000445265 COX6CP09669 75 aa13.3□□□□□ -0.28
TCOF1-206ENST00000445265 SSBP2P81877 361 aaPredicted RBP13.3□□□□□ -0.28
TCOF1-206ENST00000445265 YPEL4Q96NS1 127 aa13.3□□□□□ -0.28
TCOF1-206ENST00000445265 CD5LO43866 347 aa13.3□□□□□ -0.28
TCOF1-206ENST00000445265 NUPR1O60356 82 aa13.3□□□□□ -0.28
TCOF1-206ENST00000445265 MRPL16Q9NX20 251 aaKnown RBP13.3□□□□□ -0.28
TCOF1-206ENST00000445265 TRBV7-1A0A0A6YYK4 115 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 H3BRN7 92 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 LY6HO94772 140 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 IGKV3-20P01619 116 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 LAGE3Q14657 143 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 C9orf139Q6ZV77 190 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 ARHGAP21Q5T5U3 1957 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 H7C1H1 209 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 IGLL1P15814 213 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 FAM104BQ5XKR9 115 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 NDUFB8O95169 186 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 LTAP01374 205 aa13.29□□□□□ -0.28
TCOF1-206ENST00000445265 MCRIP2Q9BUT9 160 aaKnown RBP13.29□□□□□ -0.28
TCOF1-206ENST00000445265 BRWD1-AS2P59051 145 aa13.28□□□□□ -0.28
TCOF1-206ENST00000445265 IGHV1-24A0A0C4DH33 117 aa13.28□□□□□ -0.28
TCOF1-206ENST00000445265 PRSS46E5RG02 174 aa13.28□□□□□ -0.28
TCOF1-206ENST00000445265 KLF5Q13887 457 aaPredicted RBP13.28□□□□□ -0.28
TCOF1-206ENST00000445265 PRSS2P07478 247 aa13.28□□□□□ -0.28
TCOF1-206ENST00000445265 GAGE1Q13065 139 aa13.28□□□□□ -0.28
TCOF1-206ENST00000445265 CTSZQ9UBR2 303 aa13.28□□□□□ -0.28
TCOF1-206ENST00000445265 CACNA1BQ00975 2339 aa13.28□□□□□ -0.28
TCOF1-206ENST00000445265 LINC01549A6NIU2 74 aa13.27□□□□□ -0.28
TCOF1-206ENST00000445265 NPFFR1Q9GZQ6 430 aa13.27□□□□□ -0.28
TCOF1-206ENST00000445265 CYSLTR1Q9Y271 337 aa13.27□□□□□ -0.28
TCOF1-206ENST00000445265 PRR14LQ5THK1 2151 aa13.27□□□□□ -0.29
TCOF1-206ENST00000445265 RAX2Q96IS3 184 aa13.27□□□□□ -0.29
TCOF1-206ENST00000445265 H7C2G1 150 aa13.27□□□□□ -0.29
TCOF1-206ENST00000445265 K7EM74 188 aa13.27□□□□□ -0.29
TCOF1-206ENST00000445265 IGFL4Q6B9Z1 124 aa13.27□□□□□ -0.29
TCOF1-206ENST00000445265 PROP1O75360 226 aa13.27□□□□□ -0.29
TCOF1-206ENST00000445265 SNCGO76070 127 aa13.27□□□□□ -0.29
TCOF1-206ENST00000445265 FXYD7P58549 80 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 113.3 ms