RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 RPL7P18124 248 aaKnown RBP12.73□□□□□ -0.37
GTF3A-204ENST00000438571 TSPOP30536 169 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 S100A5P33763 92 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 UBE2MP61081 183 aaKnown RBP12.73□□□□□ -0.37
GTF3A-204ENST00000438571 RHOBP62745 196 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 KIR3DS1Q14943 382 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 DEDD2Q8WXF8 326 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 ARL6Q9H0F7 186 aa12.73□□□□□ -0.37
GTF3A-204ENST00000438571 NUDT3O95989 172 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 ANXA7P20073 488 aaKnown RBP12.72□□□□□ -0.37
GTF3A-204ENST00000438571 BTCP35070 178 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 DLK1P80370 383 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 ARL16Q0P5N6 197 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 PSG3Q16557 428 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 ZNRF2Q8NHG8 242 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 SMIM8Q96KF7 97 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 LINC01587Q99440 93 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 ARV1Q9H2C2 271 aa12.72□□□□□ -0.37
GTF3A-204ENST00000438571 RCL1Q9Y2P8 373 aaKnown RBP12.72□□□□□ -0.37
GTF3A-204ENST00000438571 LINC00854A0A1B0GVQ3 168 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 H3BTX0 84 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 OR4E1P0C645 316 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 HTN1P15515 57 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 SOHLH1Q5JUK2 328 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 MORN5Q5VZ52 161 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 RNF141Q8WVD5 230 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 SDHCQ99643 169 aaPredicted RBP12.71□□□□□ -0.37
GTF3A-204ENST00000438571 ATG101Q9BSB4 218 aa12.71□□□□□ -0.37
GTF3A-204ENST00000438571 S100A7P31151 101 aa12.7□□□□□ -0.38
GTF3A-204ENST00000438571 RPUSD4Q96CM3 377 aaKnown RBP12.7□□□□□ -0.38
GTF3A-204ENST00000438571 BATF3Q9NR55 127 aa12.7□□□□□ -0.38
GTF3A-204ENST00000438571 NDUFA13Q9P0J0 144 aa12.7□□□□□ -0.38
GTF3A-204ENST00000438571 LINC00588Q9Y4M8 146 aa12.7□□□□□ -0.38
GTF3A-204ENST00000438571 NBDYA0A0U1RRE5 68 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 PRAC2D3DTV9 90 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 SLC17A3O00476 420 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 ATP5G1P05496 136 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 ATP5G3P48201 142 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 B2MP61769 119 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 SELENOTP62341 195 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 RNASE8Q8TDE3 154 aaKnown RBP12.69□□□□□ -0.38
GTF3A-204ENST00000438571 NPVFQ9HCQ7 196 aa12.69□□□□□ -0.38
GTF3A-204ENST00000438571 K7EPK0 472 aa12.68□□□□□ -0.38
GTF3A-204ENST00000438571 TAS2R60P59551 318 aa12.68□□□□□ -0.38
GTF3A-204ENST00000438571 IAH1Q2TAA2 248 aaPredicted RBP12.68□□□□□ -0.38
GTF3A-204ENST00000438571 TEPPQ6URK8 271 aa12.68□□□□□ -0.38
GTF3A-204ENST00000438571 ZBTB8BQ8NAP8 495 aaPredicted RBP12.68□□□□□ -0.38
GTF3A-204ENST00000438571 LRRC20Q8TCA0 184 aa12.68□□□□□ -0.38
GTF3A-204ENST00000438571 C16orf74Q96GX8 76 aa12.68□□□□□ -0.38
GTF3A-204ENST00000438571 NOP10Q9NPE3 64 aaKnown RBP12.68□□□□□ -0.38
GTF3A-204ENST00000438571 ZNF331Q9NQX6 463 aaPredicted RBP12.68□□□□□ -0.38
GTF3A-204ENST00000438571 PPP1R14DQ9NXH3 145 aa12.68□□□□□ -0.38
GTF3A-204ENST00000438571 MGAT4CQ9UBM8 478 aa12.68□□□□□ -0.38
GTF3A-204ENST00000438571 ZNF701M0R085 212 aaPredicted RBP12.67□□□□□ -0.38
GTF3A-204ENST00000438571 CCSO14618 274 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 AGPAT2O15120 278 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 CDKN1BP46527 198 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 FAM3BP58499 235 aaPredicted RBP12.67□□□□□ -0.38
GTF3A-204ENST00000438571 C4orf46Q504U0 113 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 TRIQKQ629K1 86 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 LINC00305Q7Z4B0 112 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 TMEM256Q8N2U0 113 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 OR10P1Q8NGE3 313 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 TMEM37Q8WXS4 190 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 MGST2Q99735 147 aa12.67□□□□□ -0.38
GTF3A-204ENST00000438571 NAP1L6A6NFF2 107 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 CBY3A6NI87 242 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 FNDC10F2Z333 226 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 TSC22D2O75157 780 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 INPP1P49441 399 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 SPANXN2Q5MJ10 180 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 C6orf223Q8N319 242 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 GSKIPQ9P0R6 139 aa12.66□□□□□ -0.38
GTF3A-204ENST00000438571 TIMM8BQ9Y5J9 83 aaPredicted RBP12.66□□□□□ -0.38
GTF3A-204ENST00000438571 C7orf66A4D0T2 115 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 J3KRW8 73 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 MBPP02686 304 aaPredicted RBP12.65□□□□□ -0.38
GTF3A-204ENST00000438571 OPCMLQ14982 345 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 CNPY1Q3B7I2 92 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 GFI1BQ5VTD9 330 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 LCN15Q6UWW0 184 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 ZNF546Q86UE3 836 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 TMEM263Q8WUH6 116 aaKnown RBP12.65□□□□□ -0.38
GTF3A-204ENST00000438571 KRTAP1-5Q9BYS1 174 aa12.65□□□□□ -0.38
GTF3A-204ENST00000438571 C16orf90A8MZG2 172 aa12.64□□□□□ -0.39
GTF3A-204ENST00000438571 GOSR2O14653 212 aa12.64□□□□□ -0.39
GTF3A-204ENST00000438571 CXCL2P19875 107 aa12.64□□□□□ -0.39
GTF3A-204ENST00000438571 SLC50A1Q9BRV3 221 aa12.64□□□□□ -0.39
GTF3A-204ENST00000438571 TRAV5A0A0B4J249 113 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 H3BQ15 152 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 COX7A2P2O60397 106 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 IGLC2P0DOY2 106 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 HOXA5P20719 270 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 TAS2R30P59541 319 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 SSX7Q7RTT5 188 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 LINC00612Q8N6U2 182 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 MITD1Q8WV92 249 aa12.63□□□□□ -0.39
GTF3A-204ENST00000438571 A0A0J9YY99 117 aa12.62□□□□□ -0.39
GTF3A-204ENST00000438571 H7BYZ3 331 aa12.62□□□□□ -0.39
GTF3A-204ENST00000438571 IL7P13232 177 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms