RNA–Protein interactions for RNA: ENST00000437607.1

PTPRF-208, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 788 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-208ENST00000437607 OR8I2Q8N0Y5 310 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 Q8N1Y9 231 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 MBD3L1Q8WWY6 194 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 MARC2Q969Z3 335 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 GPR82Q96P67 336 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 PAXXQ9BUH6 204 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 ELOVL1Q9BW60 279 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 EDA2RQ9HAV5 297 aa9.16□□□□□ -0.94
PTPRF-208ENST00000437607 IGHV3OR16-13A0A075B7E8 117 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 IGHV3-74A0A0B4J1X5 117 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 TRAV1-1A0A0B4J248 108 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 TRAV5A0A0B4J249 113 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 IGHV3-66A0A0C4DH42 116 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 ATF4P18848 351 aaPredicted RBP9.15□□□□□ -0.94
PTPRF-208ENST00000437607 GCHFRP30047 84 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 GALR1P47211 349 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 TM4SF20Q53R12 229 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 C1orf194Q5T5A4 169 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 IL34Q6ZMJ4 242 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 OR9G4Q8NGQ1 327 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 DYNLRB2Q8TF09 96 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 ZMAT4Q9H898 229 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 TMEM167BQ9NRX6 74 aa9.15□□□□□ -0.94
PTPRF-208ENST00000437607 C2orf70A6NJV1 201 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 PYYP10082 97 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 PSMB3P49720 205 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 PPT1P50897 306 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 FAM167A-AS1Q96KT0 104 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 RHPN1-AS1Q9BWJ2 59 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 OR51M1Q9H341 326 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 MANBALQ9NQG1 85 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 C19orf73Q9NVV2 129 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 TMEM14CQ9P0S9 112 aa9.14□□□□□ -0.95
PTPRF-208ENST00000437607 HELTA6NFD8 242 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 BUB3O43684 328 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 OR10J4P0C629 311 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 IGHV4-30-4P0DP06 118 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 SIGLEC15Q6ZMC9 328 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 GLMPQ8WWB7 406 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 GNG13Q9P2W3 67 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 SMPXQ9UHP9 88 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 U3KQE9 123 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 DNAH10Q8IVF4 4471 aa9.13□□□□□ -0.95
PTPRF-208ENST00000437607 A8MZ25 164 aa9.12□□□□□ -0.95
PTPRF-208ENST00000437607 CHEK1O14757 476 aa9.12□□□□□ -0.95
PTPRF-208ENST00000437607 IGLV1-51P01701 117 aa9.12□□□□□ -0.95
PTPRF-208ENST00000437607 APOHP02749 345 aaPredicted RBP9.12□□□□□ -0.95
PTPRF-208ENST00000437607 MEOX2P50222 304 aa9.12□□□□□ -0.95
PTPRF-208ENST00000437607 C16orf54Q6UWD8 224 aa9.12□□□□□ -0.95
PTPRF-208ENST00000437607 ADAMTSL5Q6ZMM2 481 aa9.12□□□□□ -0.95
PTPRF-208ENST00000437607 LYPD6BQ8NI32 183 aa9.12□□□□□ -0.95
PTPRF-208ENST00000437607 CD5P06127 495 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 HIST1H1EP10412 219 aaKnown RBP9.11□□□□□ -0.95
PTPRF-208ENST00000437607 BCL2P10415 239 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 FOLR2P14207 255 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 EDN2P20800 178 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 TAGLN2P37802 199 aaKnown RBP9.11□□□□□ -0.95
PTPRF-208ENST00000437607 TOR2AQ5JU69 321 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 COMMD7Q86VX2 200 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 BLNKQ8WV28 456 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 FXYD5Q96DB9 178 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 ZNF503Q96F45 646 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 TMPRSS5Q9H3S3 457 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 ARL2-SNX15V9GYD0 113 aa9.11□□□□□ -0.95
PTPRF-208ENST00000437607 A0A087X0K7 114 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 ZNF785A8K8V0 405 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 MRPS12O15235 138 aaKnown RBP9.1□□□□□ -0.95
PTPRF-208ENST00000437607 IGLC2P0DOY2 106 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 CBLN1P23435 193 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 UBE2G2P60604 165 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 RPL11P62913 178 aaKnown RBP9.1□□□□□ -0.95
PTPRF-208ENST00000437607 PDE6HQ13956 83 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 GUK1Q16774 197 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 TCF24Q7RTU0 167 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 KMT2AQ03164 3969 aa9.1□□□□□ -0.95
PTPRF-208ENST00000437607 H3BTX0 84 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 CSN3P07498 182 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 SNRPCP09234 159 aaKnown RBP9.09□□□□□ -0.95
PTPRF-208ENST00000437607 NBEAP1P0C6P0 100 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 CCL20P78556 96 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 NDUFA5Q16718 116 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 HAGHQ16775 308 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 SAMD13Q5VXD3 122 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 FAM210AQ96ND0 272 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 SLC50A1Q9BRV3 221 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 EIF5A2Q9GZV4 153 aaKnown RBP9.09□□□□□ -0.95
PTPRF-208ENST00000437607 MED9Q9NWA0 146 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 MLXQ9UH92 298 aa9.09□□□□□ -0.95
PTPRF-208ENST00000437607 IGKV3-7A0A075B6H7 116 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 TRBV19A0A075B6N1 114 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 LOC102723971A0A1B0GUV8 181 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 LINC00862A6NCI5 91 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 H3BQ15 152 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 PAGE4O60829 102 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 ZNF253O75346 499 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 CST9LP1Q5W188 147 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 AAMDCQ9H7C9 122 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 NRN1Q9NPD7 142 aa9.08□□□□□ -0.96
PTPRF-208ENST00000437607 ZNF586Q9NXT0 402 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms