RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 FAM167A-AS1Q96KT0 104 aa12.36□□□□□ -0.43
CTDSPL-204ENST00000435525 LINC00052Q96N35 136 aa12.36□□□□□ -0.43
CTDSPL-204ENST00000435525 AAMDCQ9H7C9 122 aa12.36□□□□□ -0.43
CTDSPL-204ENST00000435525 BOLA2-SMG1P6H3BVE0 249 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 MRPS12O15235 138 aaKnown RBP12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 STAG3L2P0CL84 134 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 STAG3L3P0CL85 134 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 IGLC2P0DOY2 106 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 PYYP10082 97 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 DEFB131AP59861 70 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 IQCF2Q8IXL9 164 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 BLNKQ8WV28 456 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 MAP6D1Q9H9H5 199 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 TMEM167BQ9NRX6 74 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 UBQLN2Q9UHD9 624 aa12.35□□□□□ -0.43
CTDSPL-204ENST00000435525 TRBV19A0A075B6N1 114 aa12.34□□□□□ -0.43
CTDSPL-204ENST00000435525 OR10J4P0C629 311 aa12.34□□□□□ -0.43
CTDSPL-204ENST00000435525 DEFB121Q5J5C9 76 aa12.34□□□□□ -0.43
CTDSPL-204ENST00000435525 FAM74A1Q5RGS3 127 aa12.34□□□□□ -0.43
CTDSPL-204ENST00000435525 PRELID1Q9Y255 219 aa12.34□□□□□ -0.43
CTDSPL-204ENST00000435525 MAP1LC3B2A6NCE7 125 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 H3BQ15 152 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 ARL14EPLP0DKL9 152 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 SULT1A2P50226 295 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 DEFA6Q01524 100 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 EBLN2Q6P2I7 272 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 LYPD1Q8N2G4 141 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 ZNF738Q8NE65 137 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 MRAPQ8TCY5 172 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 MAP1LC3BQ9GZQ8 125 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 ZNF331Q9NQX6 463 aaPredicted RBP12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 ZNF586Q9NXT0 402 aa12.33□□□□□ -0.44
CTDSPL-204ENST00000435525 PKD1L1Q8TDX9 2849 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 SOCS3O14543 225 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 PRB2P02812 416 aaPredicted RBP12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 H2AFB1P0C5Y9 115 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 GCHFRP30047 84 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 Q8N1Y9 231 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 SFT2D1Q8WV19 159 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 FXYD5Q96DB9 178 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 SRD5A3Q9H8P0 318 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 BOLA1Q9Y3E2 137 aa12.32□□□□□ -0.44
CTDSPL-204ENST00000435525 H3BTX0 84 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 HBE1P02100 147 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 SNRPCP09234 159 aaKnown RBP12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 CSN1S1P47710 185 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 PSG3Q16557 428 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 STHQ8IWL8 128 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 FAM24BQ8N5W8 94 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 DEFB125Q8N687 156 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 SAT2Q96F10 170 aaPredicted RBP12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 C17orf77Q96MU5 243 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 TRRAPQ9Y4A5 3859 aa12.31□□□□□ -0.44
CTDSPL-204ENST00000435525 IGHV4-30-4P0DP06 118 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 PPT1P50897 306 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 BLOC1S1P78537 153 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 ALKAL2Q6UX46 152 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 FOXI2Q6ZQN5 318 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 APRG1Q8IVJ8 170 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 MBD3L1Q8WWY6 194 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 MRPL53Q96EL3 112 aaKnown RBP12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 C19orf73Q9NVV2 129 aa12.3□□□□□ -0.44
CTDSPL-204ENST00000435525 ZNF705EA8MWA4 302 aaPredicted RBP12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 A8MZ25 164 aa12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 K7EIL1 84 aa12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 DUSP14O95147 198 aaKnown RBP12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 IFNA7P01567 189 aa12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 RANP62826 216 aaKnown RBP12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 ZNF726P1Q15940 193 aa12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 CMTM2Q8TAZ6 248 aa12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 RXFP4Q8TDU9 374 aa12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 ZNF503Q96F45 646 aa12.29□□□□□ -0.44
CTDSPL-204ENST00000435525 DNHD1Q96M86 4753 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 LOC102724200A0A096LPH7 203 aaPredicted RBP12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 TRAV8-2A0A0B4J237 113 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 SLC17A3O00476 420 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 EIF3GO75821 320 aaKnown RBP eCLIP12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 FHITP49789 147 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 FGF8P55075 233 aaPredicted RBP12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 NUTF2P61970 127 aaKnown RBP12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 ACTL10Q5JWF8 245 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 RNF182Q8N6D2 247 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 OR10J6PQ8NGY7 276 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 RPUSD4Q96CM3 377 aaKnown RBP12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 NKX6-2Q9C056 277 aaPredicted RBP12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 OTORQ9NRC9 128 aa12.28□□□□□ -0.44
CTDSPL-204ENST00000435525 NDUFB4O95168 129 aa12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 APOC4P55056 127 aa12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 ICAM4Q14773 271 aa12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 IGFL4Q6B9Z1 124 aa12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 WFDC10AQ9H1F0 79 aa12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 Q9H3A6 140 aa12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 SAV1Q9H4B6 383 aaPredicted RBP12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 PPP1R14DQ9NXH3 145 aa12.27□□□□□ -0.45
CTDSPL-204ENST00000435525 SORL1Q92673 2214 aa12.26□□□□□ -0.45
CTDSPL-204ENST00000435525 TRAV1-1A0A0B4J248 108 aa12.26□□□□□ -0.45
CTDSPL-204ENST00000435525 KNCNA6PVL3 124 aa12.26□□□□□ -0.45
CTDSPL-204ENST00000435525 HLA-DRB4P13762 266 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms