RNA–Protein interactions for RNA: ENST00000423113.5

ITGB1-205, Transcript of integrin subunit beta 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene ITGB1, Length 3,729 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-205ENST00000423113 FCGR3BO75015 233 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 RPL13AP40429 203 aaKnown RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 GNG5P63218 68 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 FOXE3Q13461 319 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 KLF5Q13887 457 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 EFNB3Q15768 340 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 C12orf74Q32Q52 190 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 SP5Q6BEB4 398 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 OR4C13Q8NGP0 309 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 RASL11BQ9BPW5 248 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 CXXC4Q9H2H0 198 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 EPDR1Q9UM22 224 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 CSDC2Q9Y534 153 aaKnown RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 TRAV8-4A0A0B4J246 113 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 TRAV25A0A0B4J276 109 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 TCRBV4S1A1TA0A5B7 111 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 NPIPB6E9PJ23 425 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 CCL21O00585 134 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 SYNGR3O43761 229 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 THBDP07204 575 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 RPL7P18124 248 aaKnown RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 LINC01545Q5VT33 79 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 ZNF474Q6S9Z5 364 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 C15orf53Q8NAA6 179 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 RND1Q92730 232 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 LYZL4Q96KX0 146 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 ZNF488Q96MN9 340 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 TMEM126AQ9H061 195 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 AAMDCQ9H7C9 122 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 EDA2RQ9HAV5 297 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 PRRC2CQ9Y520 2896 aaKnown RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 CR1P17927 2039 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 IGKV1-12A0A0C4DH73 117 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 SMIM27A0A1W2PRY6 76 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 NCBP2LA6PVI3 153 aaKnown RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 DEFB108AA8MXU0 73 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 NCR2O95944 276 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 PLAUP00749 431 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 IGKV1D-12P01611 117 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 RSPO1Q2MKA7 263 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 KLF17Q5JT82 389 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 C11orf71Q6IPW1 123 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 DUX4L9Q6RFH8 374 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 DRAM1Q8N682 238 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 RFESDQ8TAC1 157 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 FOXC2Q99958 501 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 ZNF747Q9BV97 191 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 TM2D2Q9BX73 214 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 BEX4Q9NWD9 120 aaPredicted RBP3.94□□□□□ -1.78
ITGB1-205ENST00000423113 IDI2-AS1Q9NZ38 188 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 ONECUT1Q9UBC0 465 aa3.94□□□□□ -1.78
ITGB1-205ENST00000423113 ABCA1O95477 2261 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 IGHV3-15A0A0B4J1V0 119 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 IGHV3-43A0A0B4J1X8 118 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 ZNHIT1O43257 154 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 IGHV3-43DP0DP04 118 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 IGHV1-2P23083 117 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 HSPE1P61604 102 aaKnown RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 RRN3P1Q2M238 152 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 OR1L4Q8NGR5 311 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 GNG12Q9UBI6 72 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 POLDIP2Q9Y2S7 368 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 INTS1Q8N201 2190 aaKnown RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 ZNF469Q96JG9 3925 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 CMYA5Q8N3K9 4069 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 CHD6Q8TD26 2715 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 IGLV3-9A0A075B6K5 115 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 TRAV2A0A0B4J234 112 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 LINC01549A6NIU2 74 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 FOXI3A8MTJ6 420 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 IGKV1-39P01597 117 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 IGKV1D-39P04432 117 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 DTX2Q86UW9 622 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 CEND1Q8N111 149 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 OR10J6PQ8NGY7 276 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 SRSF12Q8WXF0 261 aaKnown RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 C10orf35Q96D05 121 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 RPP21Q9H633 154 aaKnown RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 LOC107984640A0A0U1RRK4 108 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 PGPA6NDG6 321 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 VWC2LB2RUY7 222 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 H3BTX0 84 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 J3KT08 172 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 OVOL3O00110 214 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 HBDP02042 147 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 C8orf88P0DMB2 117 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 TBC1D28Q2M2D7 210 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 ZC2HC1BQ5TFG8 222 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 TMEM42Q69YG0 159 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 TREML4Q6UXN2 200 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 RBPMS2Q6ZRY4 209 aaKnown RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 ATP5L2Q7Z4Y8 100 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 CIARTQ8N365 385 aaPredicted RBP3.93□□□□□ -1.78
ITGB1-205ENST00000423113 PAXXQ9BUH6 204 aa3.93□□□□□ -1.78
ITGB1-205ENST00000423113 SVILO95425 2214 aa3.92□□□□□ -1.78
ITGB1-205ENST00000423113 C9JAW5 83 aa3.92□□□□□ -1.78
ITGB1-205ENST00000423113 PEX7O00628 323 aa3.92□□□□□ -1.78
ITGB1-205ENST00000423113 LTAP01374 205 aa3.92□□□□□ -1.78
ITGB1-205ENST00000423113 IGHV3-13P01766 116 aa3.92□□□□□ -1.78
ITGB1-205ENST00000423113 AREGP15514 252 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms