RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 HMGN2P46Q86SG4 172 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 LINC01561Q8N1V8 128 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 FAM19A2Q8N3H0 131 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 RAB42Q8N4Z0 105 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 IL1F10Q8WWZ1 152 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 TMEM230Q96A57 120 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 LINC01600Q96MT4 127 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 C16orf95Q9H693 158 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 ZNF665Q9H7R5 613 aa3.27□□□□□ -1.89
PTPN22-202ENST00000420377 ANKRD17O75179 2603 aaKnown RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 EXPH5Q8NEV8 1989 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 IGHV1-24A0A0C4DH33 117 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 M0R1B8 84 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 PIN1P1O15428 100 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 CD7P09564 240 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 ASAH2BP0C7U1 165 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 HLA-DRB4P13762 266 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 SPINT3P49223 89 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 UBE2E1P51965 193 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 GFERP55789 205 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 DSCR4P56555 118 aaPredicted RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 SUPT4H1P63272 117 aaKnown RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 ZNF542PQ5EBM4 170 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 ZNF493Q6ZR52 646 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 Q71RC1 249 aaPredicted RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 AMN1Q8IY45 258 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 LRRC29Q8WV35 223 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 NABP1Q96AH0 204 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 DNAJA3Q96EY1 480 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 UBE2E2Q96LR5 201 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 SAP30LQ9HAJ7 183 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 CKLFQ9UBR5 152 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 HLA-DRB4X5D2U9 266 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 ABCA2Q9BZC7 2435 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 SDK1Q7Z5N4 2213 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 RAI1Q7Z5J4 1906 aaPredicted RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 IGHV1-45A0A0A0MS14 117 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 A0A1B0GTH9 108 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 MDFIC2A0A1B0GVS7 189 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 NCBP2LA6PVI3 153 aaKnown RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 SSSCA1O60232 199 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 PLA2G1BP04054 148 aaKnown RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 CLDN17P56750 224 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 CTXN1P60606 82 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 FAM120AOSQ5T036 256 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 HIST2H2BDQ6DRA6 164 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 PRR15Q8IV56 129 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 MMD2Q8IY49 270 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 C15orf53Q8NAA6 179 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 SRSF12Q8WXF0 261 aaKnown RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 KLK6Q92876 244 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 CHCHD1Q96BP2 118 aaKnown RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 BORCS8Q96FH0 119 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 FMC1Q96HJ9 113 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 ABHD14BQ96IU4 210 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 ODF3Q96PU9 254 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 AAMDCQ9H7C9 122 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 RPUSD1Q9UJJ7 312 aaKnown RBP3.26□□□□□ -1.89
PTPN22-202ENST00000420377 IGF2RP11717 2491 aa3.26□□□□□ -1.89
PTPN22-202ENST00000420377 A8MWV9 139 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 BMPR1BO00238 502 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 PDCD6O75340 191 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 PEBP1P30086 187 aaKnown RBP3.25□□□□□ -1.89
PTPN22-202ENST00000420377 DUTP33316 252 aaKnown RBP3.25□□□□□ -1.89
PTPN22-202ENST00000420377 LIM2P55344 173 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 SRYQ05066 204 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 SP6Q3SY56 376 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 OR2T6Q8NHC8 308 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 C11orf45Q8TAV5 145 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 EMC6Q9BV81 110 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 ZNF747Q9BV97 191 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 GLIPR2Q9H4G4 154 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 GTF3C1Q12789 2109 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 MED13Q9UHV7 2174 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 TRPM6Q9BX84 2022 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 EPPINO95925 133 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 IGKCP01834 107 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 COX6A1P12074 109 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 GYPEP15421 78 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 PQLC2Q6ZP29 291 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 SEM1Q6ZVN7 128 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 TRAPPC6BQ86SZ2 158 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 RTL8AQ9BWD3 113 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 LY96Q9Y6Y9 160 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 ACACAQ13085 2346 aa3.25□□□□□ -1.89
PTPN22-202ENST00000420377 CNOT1A5YKK6 2376 aaKnown RBP3.25□□□□□ -1.89
PTPN22-202ENST00000420377 ANKRD11Q6UB99 2663 aaPredicted RBP3.24□□□□□ -1.89
PTPN22-202ENST00000420377 TRAV2A0A0B4J234 112 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 IZUMO1RA6ND01 250 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 J3QLW9 94 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 LYZL6O75951 148 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 NDUFB2O95178 105 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 SLC25A14O95258 325 aaPredicted RBP3.24□□□□□ -1.89
PTPN22-202ENST00000420377 GYPBP06028 91 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 SCGB1C2P0DMR2 95 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 CTLA4P16410 223 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 ZNF20P17024 532 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 COL8A2P25067 703 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 SERF2P84101 59 aa3.24□□□□□ -1.89
PTPN22-202ENST00000420377 ARFRP1Q13795 201 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms