RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 CCDC190Q86UF4 302 aa10.37□□□□□ -0.75
RPS28-201ENST00000417088 TMEM256Q8N2U0 113 aa10.37□□□□□ -0.75
RPS28-201ENST00000417088 SMIM8Q96KF7 97 aa10.37□□□□□ -0.75
RPS28-201ENST00000417088 PPP1R14DQ9NXH3 145 aa10.37□□□□□ -0.75
RPS28-201ENST00000417088 K7EPK0 472 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 SSSCA1O60232 199 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 HTN1P15515 57 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 C6orf223Q8N319 242 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 LRRC20Q8TCA0 184 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 RPUSD4Q96CM3 377 aaKnown RBP10.36□□□□□ -0.75
RPS28-201ENST00000417088 NPVFQ9HCQ7 196 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 LINC00588Q9Y4M8 146 aa10.36□□□□□ -0.75
RPS28-201ENST00000417088 TIMM8BQ9Y5J9 83 aaPredicted RBP10.36□□□□□ -0.75
RPS28-201ENST00000417088 FNDC10F2Z333 226 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 NDUFB6O95139 128 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 METTL15P1P0C7V9 234 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 S100A5P33763 92 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 CCL18P55774 89 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 S100A7AQ86SG5 101 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 RNF141Q8WVD5 230 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 C16orf74Q96GX8 76 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 ARL6Q9H0F7 186 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 ARV1Q9H2C2 271 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 NOP10Q9NPE3 64 aaKnown RBP10.35□□□□□ -0.75
RPS28-201ENST00000417088 FLVCR2Q9UPI3 526 aa10.35□□□□□ -0.75
RPS28-201ENST00000417088 C16orf90A8MZG2 172 aa10.34□□□□□ -0.75
RPS28-201ENST00000417088 ANXA7P20073 488 aaKnown RBP10.34□□□□□ -0.75
RPS28-201ENST00000417088 CDKN1BP46527 198 aa10.34□□□□□ -0.75
RPS28-201ENST00000417088 SLC38A11Q08AI6 406 aa10.34□□□□□ -0.75
RPS28-201ENST00000417088 TEPPQ6URK8 271 aa10.34□□□□□ -0.75
RPS28-201ENST00000417088 ZNF493Q6ZR52 646 aa10.34□□□□□ -0.75
RPS28-201ENST00000417088 OR10P1Q8NGE3 313 aa10.34□□□□□ -0.75
RPS28-201ENST00000417088 RNASE8Q8TDE3 154 aaKnown RBP10.34□□□□□ -0.75
RPS28-201ENST00000417088 SRRQ9GZT4 340 aa10.34□□□□□ -0.75
RPS28-201ENST00000417088 ZNF331Q9NQX6 463 aaPredicted RBP10.34□□□□□ -0.75
RPS28-201ENST00000417088 SNRPCP09234 159 aaKnown RBP10.33□□□□□ -0.76
RPS28-201ENST00000417088 OR4E1P0C645 316 aa10.33□□□□□ -0.76
RPS28-201ENST00000417088 CXCL2P19875 107 aa10.33□□□□□ -0.76
RPS28-201ENST00000417088 KIR3DS1Q14943 382 aa10.33□□□□□ -0.76
RPS28-201ENST00000417088 TMEM263Q8WUH6 116 aaKnown RBP10.33□□□□□ -0.76
RPS28-201ENST00000417088 MGAT4CQ9UBM8 478 aa10.33□□□□□ -0.76
RPS28-201ENST00000417088 RNF24Q9Y225 148 aa10.33□□□□□ -0.76
RPS28-201ENST00000417088 NAP1L6A6NFF2 107 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 H7BYZ3 331 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 TSC22D2O75157 780 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 SCGB1D2O95969 90 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 TAS2R30P59541 319 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 ARL16Q0P5N6 197 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 CLINT1Q14677 625 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 BAK1Q16611 211 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 IAH1Q2TAA2 248 aaPredicted RBP10.32□□□□□ -0.76
RPS28-201ENST00000417088 PXDC1Q5TGL8 231 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 LCN15Q6UWW0 184 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 SSX7Q7RTT5 188 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 LINC00305Q7Z4B0 112 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 PARD6GQ9BYG4 376 aaPredicted RBP10.32□□□□□ -0.76
RPS28-201ENST00000417088 DNAH5Q8TE73 4624 aa10.32□□□□□ -0.76
RPS28-201ENST00000417088 PRAC2D3DTV9 90 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 GOSR2O14653 212 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 AGPAT2O15120 278 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 CDK2AP2O75956 126 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 ZNF546Q86UE3 836 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 LINC00612Q8N6U2 182 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 ZBTB8BQ8NAP8 495 aaPredicted RBP10.31□□□□□ -0.76
RPS28-201ENST00000417088 C20orf144Q9BQM9 153 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 SLC50A1Q9BRV3 221 aa10.31□□□□□ -0.76
RPS28-201ENST00000417088 RCL1Q9Y2P8 373 aaKnown RBP10.31□□□□□ -0.76
RPS28-201ENST00000417088 APOBP04114 4563 aaKnown RBP10.3□□□□□ -0.76
RPS28-201ENST00000417088 CCDC160A6NGH7 325 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 H3BTX0 84 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 SLC17A3O00476 420 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 INPP1P49441 399 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 OR5I1Q13606 314 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 C4orf46Q504U0 113 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 SPANXN2Q5MJ10 180 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 GFI1BQ5VTD9 330 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 MORN5Q5VZ52 161 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 BPIFA4PQ86YQ2 179 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 OR10J6PQ8NGY7 276 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 TMEM37Q8WXS4 190 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 GNPNAT1Q96EK6 184 aaPredicted RBP10.3□□□□□ -0.76
RPS28-201ENST00000417088 Q9H8V8 135 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 GSKIPQ9P0R6 139 aa10.3□□□□□ -0.76
RPS28-201ENST00000417088 TRAV26-1A0A087WT03 109 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 LINC00854A0A1B0GVQ3 168 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 C7orf66A4D0T2 115 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 MBPP02686 304 aaPredicted RBP10.29□□□□□ -0.76
RPS28-201ENST00000417088 M6PRP20645 277 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 BTCP35070 178 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 OPCMLQ14982 345 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 TRIQKQ629K1 86 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 CCDC28AQ8IWP9 274 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 RXFP4Q8TDU9 374 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 SAT2Q96F10 170 aaPredicted RBP10.29□□□□□ -0.76
RPS28-201ENST00000417088 ZNF503Q96F45 646 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 MGST2Q99735 147 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 GGACTQ9BVM4 153 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 KRTAP1-5Q9BYS1 174 aa10.29□□□□□ -0.76
RPS28-201ENST00000417088 A0A0J9YY99 117 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms