RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 GAGE10A6NGK3 116 aa13.9□□□□□ -0.18
SDCBP-202ENST00000413219 C9orf118A6NHY6 69 aa13.9□□□□□ -0.18
SDCBP-202ENST00000413219 D6R8Y8 96 aa13.9□□□□□ -0.18
SDCBP-202ENST00000413219 FOXE3Q13461 319 aa13.9□□□□□ -0.18
SDCBP-202ENST00000413219 UFSP1Q6NVU6 142 aa13.9□□□□□ -0.18
SDCBP-202ENST00000413219 OR8A1Q8NGG7 326 aa13.9□□□□□ -0.18
SDCBP-202ENST00000413219 NHLH1Q02575 133 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 HSD52Q0P140 79 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 LYZL1Q6UWQ5 148 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 COX8CQ7Z4L0 72 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 DEFB123Q8N688 67 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 RNF125Q96EQ8 232 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 NPFFR1Q9GZQ6 430 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 RABAC1Q9UI14 185 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 RALYQ9UKM9 306 aaKnown RBP13.89□□□□□ -0.19
SDCBP-202ENST00000413219 PLXNB1O43157 2135 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 SPAARA0A1B0GVQ0 90 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 WI2-2373I1.2A0A1W2PRP0 233 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 TMEM189A5PLL7 270 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 SMAD7O15105 426 aaKnown RBP13.89□□□□□ -0.19
SDCBP-202ENST00000413219 HBDP02042 147 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 FAM106CPP0CH98 169 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 LOXL1Q08397 574 aaPredicted RBP13.89□□□□□ -0.19
SDCBP-202ENST00000413219 FAM106AQ4KMX7 169 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 TPPP3Q9BW30 176 aa13.89□□□□□ -0.19
SDCBP-202ENST00000413219 SVILO95425 2214 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 A0A0G2JNJ9 132 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 PAX8Q06710 450 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 OR4X2Q8NGF9 303 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 AP1S3Q96PC3 154 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 RAB1BQ9H0U4 201 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 AAMDCQ9H7C9 122 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 DYNLRB1Q9NP97 96 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 Q9UFV3 132 aa13.88□□□□□ -0.19
SDCBP-202ENST00000413219 SNAI2O43623 268 aa13.87□□□□□ -0.19
SDCBP-202ENST00000413219 PLGLAQ15195 96 aa13.87□□□□□ -0.19
SDCBP-202ENST00000413219 RPEQ96AT9 228 aa13.87□□□□□ -0.19
SDCBP-202ENST00000413219 WDFY4Q6ZS81 3184 aa13.87□□□□□ -0.19
SDCBP-202ENST00000413219 A1L4Q6 167 aa13.87□□□□□ -0.19
SDCBP-202ENST00000413219 FBLL1A6NHQ2 334 aaKnown RBP13.87□□□□□ -0.19
SDCBP-202ENST00000413219 IL4P05112 153 aa13.87□□□□□ -0.19
SDCBP-202ENST00000413219 C8orf49Q96NF6 230 aa13.87□□□□□ -0.19
SDCBP-202ENST00000413219 COL25A1Q9BXS0 654 aaPredicted RBP13.87□□□□□ -0.19
SDCBP-202ENST00000413219 LOC389332A0A1B0GUA5 103 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 M0R3E3 92 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 SH2D1AO60880 128 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 MRPL51Q4U2R6 128 aaKnown RBP13.86□□□□□ -0.19
SDCBP-202ENST00000413219 PSMG4Q5JS54 123 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 ASCL2Q99929 193 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 TMEM213A2RRL7 107 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 LY6LH3BQJ8 138 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 CACNG7P62955 275 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 AMN1Q8IY45 258 aa13.86□□□□□ -0.19
SDCBP-202ENST00000413219 COL6A3P12111 3177 aa13.85□□□□□ -0.19
SDCBP-202ENST00000413219 KLK10O43240 276 aa13.85□□□□□ -0.19
SDCBP-202ENST00000413219 CNIH1O95406 144 aa13.85□□□□□ -0.19
SDCBP-202ENST00000413219 FCGR2BP31994 310 aaPredicted RBP13.85□□□□□ -0.19
SDCBP-202ENST00000413219 IFI27L1Q96BM0 104 aa13.85□□□□□ -0.19
SDCBP-202ENST00000413219 JKAMPQ9P055 326 aa13.85□□□□□ -0.19
SDCBP-202ENST00000413219 K7EP34 96 aa13.84□□□□□ -0.19
SDCBP-202ENST00000413219 UQCRFS1P47985 274 aa13.84□□□□□ -0.19
SDCBP-202ENST00000413219 ADAMTSL5Q6ZMM2 481 aa13.84□□□□□ -0.19
SDCBP-202ENST00000413219 PIFOQ8TCI5 191 aa13.84□□□□□ -0.19
SDCBP-202ENST00000413219 ZNF48Q96MX3 618 aaPredicted RBP13.84□□□□□ -0.19
SDCBP-202ENST00000413219 CSTL1Q9H114 145 aa13.84□□□□□ -0.19
SDCBP-202ENST00000413219 FER1L6-AS1Q8NA97 138 aa13.84□□□□□ -0.19
SDCBP-202ENST00000413219 PRRG2O14669 202 aa13.83□□□□□ -0.2
SDCBP-202ENST00000413219 KIR3DS1Q14943 382 aa13.83□□□□□ -0.2
SDCBP-202ENST00000413219 THYN1Q9P016 225 aa13.83□□□□□ -0.2
SDCBP-202ENST00000413219 SHISA9B4DS77 424 aa13.83□□□□□ -0.2
SDCBP-202ENST00000413219 CEACAM3P40198 252 aa13.83□□□□□ -0.2
SDCBP-202ENST00000413219 DLX1P56177 255 aa13.83□□□□□ -0.2
SDCBP-202ENST00000413219 JMJD8Q96S16 334 aa13.83□□□□□ -0.2
SDCBP-202ENST00000413219 A0A0G2JLM5 398 aa13.82□□□□□ -0.2
SDCBP-202ENST00000413219 E7EQL1 145 aa13.82□□□□□ -0.2
SDCBP-202ENST00000413219 COX7A1P24310 79 aa13.82□□□□□ -0.2
SDCBP-202ENST00000413219 CKS2P33552 79 aa13.82□□□□□ -0.2
SDCBP-202ENST00000413219 SRSF2Q01130 221 aaKnown RBP13.82□□□□□ -0.2
SDCBP-202ENST00000413219 MALRD1Q5VYJ5 2156 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 TMSB15BA0A087X1C1 80 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 PPIAL4CA0A0B4J2A2 164 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 LINC01546A6NGU7 62 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 H3BUT2 72 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 PPIAL4GP0DN37 164 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 PRR25Q96S07 402 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 MEGF9Q9H1U4 602 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 GNG7O60262 68 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 NDUFS7O75251 213 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 NPYP01303 97 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 IGLC6P0CF74 106 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 BMI1P35226 326 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 OR5A1Q8NGJ0 315 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 OR2K2Q8NGT1 345 aa13.81□□□□□ -0.2
SDCBP-202ENST00000413219 TIMM23O14925 209 aa13.8□□□□□ -0.2
SDCBP-202ENST00000413219 NBR2O15453 112 aa13.8□□□□□ -0.2
SDCBP-202ENST00000413219 MFAP4P55083 255 aa13.8□□□□□ -0.2
SDCBP-202ENST00000413219 GFRALQ6UXV0 394 aa13.8□□□□□ -0.2
SDCBP-202ENST00000413219 NPBQ8NG41 125 aa13.8□□□□□ -0.2
SDCBP-202ENST00000413219 ABHD17AQ96GS6 310 aa13.8□□□□□ -0.2
SDCBP-202ENST00000413219 B9A039 149 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms