RNA–Protein interactions for RNA: ENST00000411767.6

PTPN13-202, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-202ENST00000411767 ZNF837Q96EG3 531 aaPredicted RBP3.72□□□□□ -1.81
PTPN13-202ENST00000411767 NFAT5O94916 1531 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV1-3A0A0C4DH29 117 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 C8orf87E5RJ46 101 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 SH2D1AO60880 128 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 MIR17HGQ75NE6 70 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 NACAE9PAV3 2078 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 LRRC37A3O60309 1634 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 SHISA8B8ZZ34 492 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 RPS27P42677 84 aaKnown RBP3.72□□□□□ -1.81
PTPN13-202ENST00000411767 TRIP6Q15654 476 aaKnown RBP3.72□□□□□ -1.81
PTPN13-202ENST00000411767 PNRC2Q9NPJ4 139 aaKnown RBP3.72□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV4-4A0A075B6R2 117 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-11P01762 117 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 COX8AP10176 69 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 C14orf178Q8N769 122 aaPredicted RBP3.72□□□□□ -1.81
PTPN13-202ENST00000411767 DMKNQ6E0U4 476 aaPredicted RBP3.72□□□□□ -1.81
PTPN13-202ENST00000411767 LINC00312Q9Y6C7 94 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 DOCK9Q9BZ29 2069 aa3.72□□□□□ -1.81
PTPN13-202ENST00000411767 C2orf66Q6UXQ4 117 aa3.71□□□□□ -1.81
PTPN13-202ENST00000411767 WFDC10BQ8IUB3 73 aa3.71□□□□□ -1.81
PTPN13-202ENST00000411767 TEX37Q96LM6 180 aa3.71□□□□□ -1.81
PTPN13-202ENST00000411767 RASL10BQ96S79 203 aa3.71□□□□□ -1.81
PTPN13-202ENST00000411767 HCSTQ9UBK5 93 aa3.71□□□□□ -1.81
PTPN13-202ENST00000411767 IGHV3-35A0A0C4DH35 117 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV5-10-1A0A0J9YXX1 117 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 SIGLEC9Q9Y336 463 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 CENPVL1A0A0U1RR11 272 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 LMO7DNF2Z398 122 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 GTSF1Q8WW33 167 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 SND1-IT1Q9HBX3 110 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 SLIT3O75094 1523 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 TRBV7-6A0A0J9YX20 115 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 Q86TA4 180 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 GFI1Q99684 422 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 NTF4P34130 210 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 GGNQ86UU5 652 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 ZC2HC1AQ96GY0 325 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 C20orf144Q9BQM9 153 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 ZNF576Q9H609 170 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 POLR3KQ9Y2Y1 108 aaPredicted RBP3.71□□□□□ -1.82
PTPN13-202ENST00000411767 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.71□□□□□ -1.82
PTPN13-202ENST00000411767 NPSP0C0P6 89 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 LIMS1P48059 325 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 FHL1Q13642 323 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 ZNF501Q96CX3 271 aaPredicted RBP3.71□□□□□ -1.82
PTPN13-202ENST00000411767 TRGV9Q99603 122 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 RETNLBQ9BQ08 111 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 LTN1O94822 1766 aa3.71□□□□□ -1.82
PTPN13-202ENST00000411767 IGLV3-16A0A075B6K0 115 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV1-18A0A0C4DH31 117 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 F8VRH5 84 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 M0QZQ0 153 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 IGKV1-5P01602 117 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 CXCL3P19876 107 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 FAM27BQ5VT28 67 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 SCXQ7RTU7 201 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 DEPPQ9NTK1 212 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 NWD1Q149M9 1564 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 SLIT2O94813 1529 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 CXCL2P19875 107 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 H2BFSP57053 126 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 C5orf64Q2M2E5 130 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 Q8N9W7 124 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 FGF23Q9GZV9 251 aaPredicted RBP3.7□□□□□ -1.82
PTPN13-202ENST00000411767 P0DMU3 169 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 FAM231AP0DMU4 169 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 FAM231CP0DMU5 169 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 MST1P26927 711 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 PPIFP30405 207 aaKnown RBP3.7□□□□□ -1.82
PTPN13-202ENST00000411767 COX17Q14061 63 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 SPATA12Q7Z6I5 190 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 TRBV6-7A0A0A0MS04 114 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 J3QRE1 110 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 FIZ1Q96SL8 496 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 LIMD2Q9BT23 127 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 PLA2G2FQ9BZM2 168 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 MINOS1-NBL1R4GNA1 71 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 MYH14Q7Z406 1995 aaKnown RBP3.7□□□□□ -1.82
PTPN13-202ENST00000411767 TRBV10-3A0A0K0K1G6 114 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 A0A1W2PPC1 479 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 NDUFA7O95182 113 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 CCL4P13236 92 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 NDUFA4L2Q9NRX3 87 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 MSRB2Q9Y3D2 182 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 CHCHD2Q9Y6H1 151 aaPredicted RBP3.7□□□□□ -1.82
PTPN13-202ENST00000411767 TRBV7-3A0A075B6L6 115 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 C3orf79P0CE67 100 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 TMEM75Q8N9X5 138 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV3OR16-10A0A075B7F0 116 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 CTSGP08311 255 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 Q0VG73 95 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 LYPD6Q86Y78 171 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 KLHL30-AS1Q8NEE0 82 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 TM2D1Q9BX74 207 aa3.7□□□□□ -1.82
PTPN13-202ENST00000411767 IGHV7-4-1A0A0J9YVY3 117 aa3.69□□□□□ -1.82
PTPN13-202ENST00000411767 NDUFV3P56181 108 aaKnown RBP3.69□□□□□ -1.82
PTPN13-202ENST00000411767 CFHR3Q02985 330 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms