RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 DNAH2Q9P225 4427 aa10.46□□□□□ -0.73
CBX3-203ENST00000409747 L7N2F9 121 aa10.46□□□□□ -0.74
CBX3-203ENST00000409747 VAMP2P63027 116 aa10.46□□□□□ -0.74
CBX3-203ENST00000409747 PSG3Q16557 428 aa10.46□□□□□ -0.74
CBX3-203ENST00000409747 LCN15Q6UWW0 184 aa10.46□□□□□ -0.74
CBX3-203ENST00000409747 C15orf53Q8NAA6 179 aa10.46□□□□□ -0.74
CBX3-203ENST00000409747 PLA2G2EQ9NZK7 142 aa10.46□□□□□ -0.74
CBX3-203ENST00000409747 ZNF705GA8MUZ8 300 aaPredicted RBP10.45□□□□□ -0.74
CBX3-203ENST00000409747 TMEM88Q6PEY1 159 aa10.45□□□□□ -0.74
CBX3-203ENST00000409747 SLC50A1Q9BRV3 221 aa10.45□□□□□ -0.74
CBX3-203ENST00000409747 FAT2Q9NYQ8 4349 aa10.45□□□□□ -0.74
CBX3-203ENST00000409747 C7orf66A4D0T2 115 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 M0R2N4 97 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 AGPAT2O15120 278 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 COX7A2P2O60397 106 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 MBPP02686 304 aaPredicted RBP10.44□□□□□ -0.74
CBX3-203ENST00000409747 PATE2Q6UY27 113 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 LINC00305Q7Z4B0 112 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 BPIFA4PQ86YQ2 179 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 DNAH17Q9UFH2 4485 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 TRAV12-2A0A075B6T6 113 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 PRSS29PA6NIE9 313 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 LYRM1O43325 122 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 FAM3BP58499 235 aaPredicted RBP10.44□□□□□ -0.74
CBX3-203ENST00000409747 TAS2R60P59551 318 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 RAB31Q13636 194 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 SOHLH1Q5JUK2 328 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 RPUSD4Q96CM3 377 aaKnown RBP10.44□□□□□ -0.74
CBX3-203ENST00000409747 LINC01587Q99440 93 aa10.44□□□□□ -0.74
CBX3-203ENST00000409747 MRPS12O15235 138 aaKnown RBP10.43□□□□□ -0.74
CBX3-203ENST00000409747 CDKN1BP46527 198 aa10.43□□□□□ -0.74
CBX3-203ENST00000409747 C16orf74Q96GX8 76 aa10.43□□□□□ -0.74
CBX3-203ENST00000409747 ZNF331Q9NQX6 463 aaPredicted RBP10.43□□□□□ -0.74
CBX3-203ENST00000409747 FAM25EA8MYX2 175 aa10.42□□□□□ -0.74
CBX3-203ENST00000409747 DEFB130BP0DP73 79 aa10.42□□□□□ -0.74
CBX3-203ENST00000409747 DEFB130AP0DP74 79 aa10.42□□□□□ -0.74
CBX3-203ENST00000409747 BCAP31P51572 246 aa10.42□□□□□ -0.74
CBX3-203ENST00000409747 ARL16Q0P5N6 197 aa10.42□□□□□ -0.74
CBX3-203ENST00000409747 MGST2Q99735 147 aa10.42□□□□□ -0.74
CBX3-203ENST00000409747 IGLV2-18A0A075B6J9 118 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 A0A1B0GVY2 172 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 CCSO14618 274 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 RTL8CO15255 209 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 TCRBP04435 133 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 PVALBP20472 110 aaPredicted RBP10.41□□□□□ -0.74
CBX3-203ENST00000409747 CAV2P51636 162 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 C10orf113Q5VZT2 155 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 Q6ZRG5 221 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 C20orf144Q9BQM9 153 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 ATG101Q9BSB4 218 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 NDUFA13Q9P0J0 144 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 LSM5Q9Y4Y9 91 aaKnown RBP10.41□□□□□ -0.74
CBX3-203ENST00000409747 PXMP4Q9Y6I8 212 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 PKHD1P08F94 4074 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 C5orf51A6NDU8 294 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 PLA2G10O15496 165 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 ATP5G1P05496 136 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 ATP5G3P48201 142 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 CAMLGP49069 296 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 ZNF493Q6ZR52 646 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 Q6ZR54 194 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 OR10J6PQ8NGY7 276 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 ZNF431Q8TF32 576 aaPredicted RBP10.41□□□□□ -0.74
CBX3-203ENST00000409747 NUDT15Q9NV35 164 aa10.41□□□□□ -0.74
CBX3-203ENST00000409747 TIMM8BQ9Y5J9 83 aaPredicted RBP10.41□□□□□ -0.74
CBX3-203ENST00000409747 TRAV6A0A075B6T7 132 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 PLAC8L1A1L4L8 177 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 H7BYZ3 331 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 PRM2P04554 102 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 AZU1P20160 251 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 OR1L4Q8NGR5 311 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 TMEM37Q8WXS4 190 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 PFDN5Q99471 154 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 UQCC1Q9NVA1 299 aa10.4□□□□□ -0.74
CBX3-203ENST00000409747 KIAA1109Q2LD37 5005 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 CBY3A6NI87 242 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 F5H768 121 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 HTN1P15515 57 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 OPCMLQ14982 345 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 GUK1Q16774 197 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 NRARPQ7Z6K4 114 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 TMEM263Q8WUH6 116 aaKnown RBP10.39□□□□□ -0.75
CBX3-203ENST00000409747 C2orf50Q96LR7 162 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 CCDC32Q9BV29 185 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 DNAJC4Q9NNZ3 241 aa10.39□□□□□ -0.75
CBX3-203ENST00000409747 IGLC2P0DOY2 106 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 STX12Q86Y82 276 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 C12orf45Q8N5I9 185 aaPredicted RBP10.38□□□□□ -0.75
CBX3-203ENST00000409747 CST7O76096 145 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 S100A11P31949 105 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 HBG1P69891 147 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 HBG2P69892 147 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 CCDC28AQ8IWP9 274 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 RNASE8Q8TDE3 154 aaKnown RBP10.38□□□□□ -0.75
CBX3-203ENST00000409747 SEC22CQ9BRL7 303 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 LYRM2Q9NU23 88 aaPredicted RBP10.38□□□□□ -0.75
CBX3-203ENST00000409747 WDR83OSQ9Y284 106 aa10.38□□□□□ -0.75
CBX3-203ENST00000409747 SLC17A3O00476 420 aa10.37□□□□□ -0.75
CBX3-203ENST00000409747 SNRPCP09234 159 aaKnown RBP10.37□□□□□ -0.75
CBX3-203ENST00000409747 H2AFB2P0C5Z0 115 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms