RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 UBE2E1P51965 193 aa13.18□□□□□ -0.3
NUP50-203ENST00000407019 ABCA1O95477 2261 aa13.18□□□□□ -0.3
NUP50-203ENST00000407019 HRNRQ86YZ3 2850 aaPredicted RBP13.18□□□□□ -0.3
NUP50-203ENST00000407019 OR2T8A6NH00 312 aa13.17□□□□□ -0.3
NUP50-203ENST00000407019 HAX1O00165 279 aa13.17□□□□□ -0.3
NUP50-203ENST00000407019 RAB4AP20338 218 aa13.17□□□□□ -0.3
NUP50-203ENST00000407019 FOXA3P55318 350 aaPredicted RBP13.17□□□□□ -0.3
NUP50-203ENST00000407019 APOHP02749 345 aaPredicted RBP13.17□□□□□ -0.3
NUP50-203ENST00000407019 FAM120AOSQ5T036 256 aa13.17□□□□□ -0.3
NUP50-203ENST00000407019 TXN2Q99757 166 aa13.17□□□□□ -0.3
NUP50-203ENST00000407019 ASCL2Q99929 193 aa13.17□□□□□ -0.3
NUP50-203ENST00000407019 SERTM2A0A1B0GWG4 89 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 FAM181BA6NEQ2 426 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 RPL7P18124 248 aaKnown RBP13.16□□□□□ -0.3
NUP50-203ENST00000407019 CSN1S1P47710 185 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 PSG9Q00887 426 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 MRPL52Q86TS9 123 aaKnown RBP13.16□□□□□ -0.3
NUP50-203ENST00000407019 ITLN2Q8WWU7 325 aaPredicted RBP13.16□□□□□ -0.3
NUP50-203ENST00000407019 LOC102724200A0A096LPH7 203 aaPredicted RBP13.16□□□□□ -0.3
NUP50-203ENST00000407019 SH2D7A6NKC9 451 aaPredicted RBP13.16□□□□□ -0.3
NUP50-203ENST00000407019 RNF224P0DH78 156 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 PRB4P10163 310 aaPredicted RBP13.16□□□□□ -0.3
NUP50-203ENST00000407019 SPATA45Q537H7 98 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 FAM110DQ8TAY7 271 aaPredicted RBP13.16□□□□□ -0.3
NUP50-203ENST00000407019 URB1-AS1Q96HZ7 61 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 BPESC1Q9GZL8 116 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 PRORYQ9H606 182 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 RABAC1Q9UI14 185 aa13.16□□□□□ -0.3
NUP50-203ENST00000407019 CTSGP08311 255 aa13.15□□□□□ -0.3
NUP50-203ENST00000407019 CTRLP40313 264 aa13.15□□□□□ -0.3
NUP50-203ENST00000407019 AJUBAQ96IF1 538 aa13.15□□□□□ -0.3
NUP50-203ENST00000407019 ATRXP46100 2492 aa13.15□□□□□ -0.3
NUP50-203ENST00000407019 A0A1B0GUT8 65 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 OVOL3O00110 214 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 CT45A10P0DMU9 189 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 SAA4P35542 130 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 CRIP1P50238 77 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 SSTP61278 116 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 LMO4P61968 165 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 NUTF2P61970 127 aaKnown RBP13.14□□□□□ -0.31
NUP50-203ENST00000407019 NDFIP1Q9BT67 221 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 TACC2O95359 2948 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 RIGQ13278 110 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 UNQ5815/PRO19632Q6UWF5 114 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 CHCHD1Q96BP2 118 aaKnown RBP13.14□□□□□ -0.31
NUP50-203ENST00000407019 C8orf49Q96NF6 230 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 LPAR2Q9HBW0 351 aa13.14□□□□□ -0.31
NUP50-203ENST00000407019 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.13□□□□□ -0.31
NUP50-203ENST00000407019 M0QZK8 103 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 BTF3P20290 206 aaKnown RBP13.13□□□□□ -0.31
NUP50-203ENST00000407019 S100A7P31151 101 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 PMCHL1Q16048 86 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 ECSCRQ19T08 205 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 Q6AWC8 147 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 EBLN2Q6P2I7 272 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 TMUB1Q9BVT8 246 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 NBASA2RRP1 2371 aa13.13□□□□□ -0.31
NUP50-203ENST00000407019 ARMS2P0C7Q2 107 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 UQCRFS1P47985 274 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 ARL6IP6Q8N6S5 226 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 A0A1B0GW15 77 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 C19orf84I3L1E1 186 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 M0QZ24 198 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 ATP6V0E1O15342 81 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 LCN12Q6JVE5 192 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 GATD1Q8NB37 220 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 ZNF502Q8TBZ5 544 aa13.12□□□□□ -0.31
NUP50-203ENST00000407019 C2orf70A6NJV1 201 aa13.11□□□□□ -0.31
NUP50-203ENST00000407019 C15orf32Q32M92 178 aa13.11□□□□□ -0.31
NUP50-203ENST00000407019 IGKV2-40A0A087WW87 121 aaPredicted RBP13.11□□□□□ -0.31
NUP50-203ENST00000407019 NPFFO15130 113 aa13.11□□□□□ -0.31
NUP50-203ENST00000407019 IGKV2D-40P01614 121 aaPredicted RBP13.11□□□□□ -0.31
NUP50-203ENST00000407019 GNLYP22749 145 aa13.11□□□□□ -0.31
NUP50-203ENST00000407019 GPR183P32249 361 aa13.11□□□□□ -0.31
NUP50-203ENST00000407019 KLK9Q2XQG4 91 aa13.11□□□□□ -0.31
NUP50-203ENST00000407019 KLK9Q9UKQ9 250 aa13.11□□□□□ -0.31
NUP50-203ENST00000407019 IGHV1-24A0A0C4DH33 117 aa13.1□□□□□ -0.31
NUP50-203ENST00000407019 FBLL1A6NHQ2 334 aaKnown RBP13.1□□□□□ -0.31
NUP50-203ENST00000407019 LINC00614P0C842 121 aa13.1□□□□□ -0.31
NUP50-203ENST00000407019 RHOGP84095 191 aa13.1□□□□□ -0.31
NUP50-203ENST00000407019 CLEC5AQ9NY25 188 aa13.1□□□□□ -0.31
NUP50-203ENST00000407019 SMAD5-AS1Q9Y6J3 95 aa13.1□□□□□ -0.31
NUP50-203ENST00000407019 COL6A6A6NMZ7 2263 aa13.1□□□□□ -0.31
NUP50-203ENST00000407019 SAPCD1Q5SSQ6 148 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 ATOH7Q8N100 152 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 KLHDC1Q8N7A1 406 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 UQCR10Q9UDW1 63 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 IGHV3-35A0A0C4DH35 117 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 TMEM189A5PLL7 270 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 SH2D1AO60880 128 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 RELQ04864 619 aaPredicted RBP13.09□□□□□ -0.31
NUP50-203ENST00000407019 COX8CQ7Z4L0 72 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 TMEM70Q9BUB7 260 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 TPPP3Q9BW30 176 aa13.09□□□□□ -0.31
NUP50-203ENST00000407019 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
NUP50-203ENST00000407019 IGLC3P0DOY3 106 aa13.08□□□□□ -0.32
NUP50-203ENST00000407019 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
NUP50-203ENST00000407019 PIP4P2Q8N4L2 257 aa13.08□□□□□ -0.32
NUP50-203ENST00000407019 IGHV3OR16-8A0A075B7F1 116 aa13.08□□□□□ -0.32
NUP50-203ENST00000407019 PRR25Q96S07 402 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms