RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 IGHG4P01861 327 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 ADORA2A-AS1P86434 159 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 FOXE3Q13461 319 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 GOLT1AQ6ZVE7 132 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 TMEM75Q8N9X5 138 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 RNF5Q99942 180 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 NGBQ9NPG2 151 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 S4R3C0 116 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 A0A1W2PPR1 153 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 EGR2P11161 476 aaPredicted RBP7.72□□□□□ -1.17
MSH2-202ENST00000406134 RBPMS2Q6ZRY4 209 aaKnown RBP7.72□□□□□ -1.17
MSH2-202ENST00000406134 PIP4P2Q8N4L2 257 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 Q8N6K4 173 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 SRSF8Q9BRL6 282 aaKnown RBP7.72□□□□□ -1.17
MSH2-202ENST00000406134 C1RLQ9NZP8 487 aa7.72□□□□□ -1.17
MSH2-202ENST00000406134 ANKHD1Q8IWZ3 2542 aaKnown RBP7.72□□□□□ -1.17
MSH2-202ENST00000406134 IGLV11-55A0A075B6I3 123 aa7.71□□□□□ -1.17
MSH2-202ENST00000406134 FAM231BA6NCW3 169 aa7.71□□□□□ -1.17
MSH2-202ENST00000406134 TOX4O94842 621 aa7.71□□□□□ -1.17
MSH2-202ENST00000406134 P01737 135 aa7.71□□□□□ -1.17
MSH2-202ENST00000406134 RNASEKQ6P5S7 137 aaKnown RBP7.71□□□□□ -1.17
MSH2-202ENST00000406134 NDFIP1Q9BT67 221 aa7.71□□□□□ -1.17
MSH2-202ENST00000406134 M0R2Z0 102 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 ZNF138P52744 262 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 RPEQ96AT9 228 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 C8orf49Q96NF6 230 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 CHRDL1Q9BU40 450 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 A0A096LNJ9 63 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 A8MWL6 223 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 ARMS2P0C7Q2 107 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 TSPOP30536 169 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 PRNTQ86SH4 94 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 RASL11BQ9BPW5 248 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 ABCA4P78363 2273 aa7.71□□□□□ -1.18
MSH2-202ENST00000406134 ABCA2Q9BZC7 2435 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 NBR2O15453 112 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 Q6ZVH6 145 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 SOX21Q9Y651 276 aaPredicted RBP7.7□□□□□ -1.18
MSH2-202ENST00000406134 NCOR2Q9Y618 2525 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 M0R3E3 92 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 SCNM1Q9BWG6 230 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 ONECUT1Q9UBC0 465 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 SMAD5-AS1Q9Y6J3 95 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 TRAV9-2A0A087WT02 112 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 FAM90A27PA6NNH2 459 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 PAX8Q06710 450 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 Q56UQ5 140 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 ZNF48Q96MX3 618 aaPredicted RBP7.7□□□□□ -1.18
MSH2-202ENST00000406134 ZFP30Q9Y2G7 519 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 HILPDAQ9Y5L2 63 aa7.7□□□□□ -1.18
MSH2-202ENST00000406134 CCL25O15444 150 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 HSBP1O75506 76 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 HLA-DRB1P01911 266 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 PSG3Q16557 428 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 COL5A1-AS1Q5SY13 56 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 RNF125Q96EQ8 232 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 LIPFP07098 398 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 FAM106CPP0CH98 169 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 ARF6P62330 175 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 FAM106AQ4KMX7 169 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 COX8CQ7Z4L0 72 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 CHCHD1Q96BP2 118 aaKnown RBP7.69□□□□□ -1.18
MSH2-202ENST00000406134 LAMTOR2Q9Y2Q5 125 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 SPTBN4Q9H254 2564 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 ZFP36P26651 326 aaKnown RBP7.69□□□□□ -1.18
MSH2-202ENST00000406134 OR4C5Q8NGB2 326 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 NEU4Q8WWR8 484 aaPredicted RBP7.69□□□□□ -1.18
MSH2-202ENST00000406134 BORCS7Q96B45 105 aa7.69□□□□□ -1.18
MSH2-202ENST00000406134 IGF2RP11717 2491 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 NPIPB5A8MRT5 1133 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 SYS1-DBNDD2H3BUS1 97 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 IL4P05112 153 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 FOXC1Q12948 553 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 C5orf64Q2M2E5 130 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 Q6ZN92 141 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 MCRIP2Q9BUT9 160 aaKnown RBP7.68□□□□□ -1.18
MSH2-202ENST00000406134 PSG8Q9UQ74 426 aa7.68□□□□□ -1.18
MSH2-202ENST00000406134 MRPS16Q9Y3D3 137 aaKnown RBP7.68□□□□□ -1.18
MSH2-202ENST00000406134 VSTM5A8MXK1 200 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 COL8A1P27658 744 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 LOXL1Q08397 574 aaPredicted RBP7.67□□□□□ -1.18
MSH2-202ENST00000406134 TTC9CQ8N5M4 171 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 DPM3Q9P2X0 92 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 NCR2O95944 276 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 HTR1DP28221 377 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 EBI3Q14213 229 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 ZNF493Q6ZR52 646 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 LYPD1Q8N2G4 141 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 TMEM70Q9BUB7 260 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 TMUB1Q9BVT8 246 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 hDV102S1A0JD36 115 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 NDUFS8O00217 210 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 ZNF80P51504 273 aaPredicted RBP7.67□□□□□ -1.18
MSH2-202ENST00000406134 U3KQK5 164 aa7.67□□□□□ -1.18
MSH2-202ENST00000406134 AKAP9Q99996 3911 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 M0R1W7 72 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 BPIFA4PQ86YQ2 179 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 CSTL1Q9H114 145 aa7.66□□□□□ -1.18
MSH2-202ENST00000406134 CHD8Q9HCK8 2581 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 492.8 ms