RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 ANKRD50Q9ULJ7 1429 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TARBP1Q13395 1621 aaKnown RBP2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SHROOM2Q13796 1616 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 CC2D2AQ9P2K1 1620 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 NUP210Q8TEM1 1887 aaPredicted RBP2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRAV27A0A087WT01 109 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 A8MUN3 132 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 A8MWP4 228 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 G3V3Q6 166 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 LST1O00453 97 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SFT2D2O95562 160 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 NCR2O95944 276 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 MT-ND6P03923 174 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRGV3P03979 118 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TMEM258P61165 79 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 Q0VG73 95 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SPRNQ5BIV9 151 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 C9orf153Q5TBE3 101 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR2T2Q6IF00 324 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SPINT4Q6UDR6 99 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 AAED1Q7RTV5 226 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 C1orf174Q8IYL3 243 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 SCRT1Q9BWW7 348 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 CYTL1Q9NRR1 136 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TAAR3PQ9P1P4 343 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 MPC1Q9Y5U8 109 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 ABCC3O15438 1527 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 CLASP1Q7Z460 1538 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 KNDC1Q76NI1 1749 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 RIC1Q4ADV7 1423 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 TET3O43151 1660 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 ITSN2Q9NZM3 1697 aa2.76□□□□□ -1.97
HMGB1P13-201ENST00000406019 RAPGEF6Q8TEU7 1601 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CDK5RAP2Q96SN8 1893 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CUX1P39880 1505 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGLV2-18A0A075B6J9 118 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGHV3OR15-7A0A075B7D8 119 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 LOC107986453A0A1B0GWG9 222 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF73O43830 326 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 YPEL1O60688 119 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 DEDDO75618 318 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1D-33P01593 117 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1-33P01594 117 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 TCRAP04437 139 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 SMIM10L2AP0DMW4 78 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 SMIM10L2BP0DMW5 78 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CRYGSP22914 178 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 DAPP51397 102 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 C22orf39Q6P5X5 142 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGFL3Q6UXB1 125 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 ADM2Q7Z4H4 148 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 RPRMLQ8N4K4 120 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 C10orf126Q8N4M7 172 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR2T10Q8NGZ9 312 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 STAG3L4Q8TBR4 150 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 YPEL2Q96QA6 119 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 AMELYQ99218 206 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 RERGLQ9H628 205 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 LINC00527Q9UJ94 153 aa2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 CHCHD2Q9Y6H1 151 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P13-201ENST00000406019 A0A1B0GUL6 1792 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRPM3Q9HCF6 1732 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 CCDC88AQ3V6T2 1871 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRBV7-6A0A0J9YX20 115 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TCRBV3S1A0A5B6 114 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 MEIS3P1A6NDR6 274 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TMEM235A6NFC5 223 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 M0R378 163 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 HYPMO75409 117 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 APOMO95445 188 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 NAPSAO96009 420 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 CYB5AP00167 134 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 CXCL1P09341 107 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGLC2P0DOY2 106 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGLC3P0DOY3 106 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 PPIBP23284 216 aaKnown RBP2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OPRM1P35372 400 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF90Q03938 601 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 KRTAP13-2Q52LG2 175 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 EBLN2Q6P2I7 272 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 SLC25A26Q70HW3 274 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR4B1Q8NGF8 309 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR5D16Q8NGK9 328 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR5C1Q8NGR4 320 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 OR51H1Q8NH63 302 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 LINC00526Q96FQ7 95 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 C20orf78Q9BR46 151 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 DUSP21Q9H596 190 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 TMEM106BQ9NUM4 274 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 GPR179Q6PRD1 2367 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 NCKAP5O14513 1909 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 MYH4Q9Y623 1939 aa2.74□□□□□ -1.97
HMGB1P13-201ENST00000406019 KMT2EQ8IZD2 1858 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 IQSEC2Q5JU85 1478 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 TRPM1Q7Z4N2 1603 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 IGKV1-12A0A0C4DH73 117 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 RBAKDNA6NC62 111 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 TLCD2A6NGC4 264 aa2.73□□□□□ -1.97
HMGB1P13-201ENST00000406019 ZNF705FA8MVS1 300 aaPredicted RBP2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms