RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 GNG13Q9P2W3 67 aa16.6■□□□□ 0.25
EPCAM-202ENST00000405271 TRBV19A0A075B6N1 114 aa16.6■□□□□ 0.25
EPCAM-202ENST00000405271 ZNF253O75346 499 aa16.6■□□□□ 0.25
EPCAM-202ENST00000405271 BLNKQ8WV28 456 aa16.6■□□□□ 0.25
EPCAM-202ENST00000405271 A0A1W2PRE2 83 aa16.59■□□□□ 0.25
EPCAM-202ENST00000405271 LINC00862A6NCI5 91 aa16.59■□□□□ 0.25
EPCAM-202ENST00000405271 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.59■□□□□ 0.25
EPCAM-202ENST00000405271 FAM210AQ96ND0 272 aa16.59■□□□□ 0.25
EPCAM-202ENST00000405271 SLC50A1Q9BRV3 221 aa16.59■□□□□ 0.25
EPCAM-202ENST00000405271 NRN1Q9NPD7 142 aa16.59■□□□□ 0.25
EPCAM-202ENST00000405271 NOTCH1P46531 2555 aa16.58■□□□□ 0.25
EPCAM-202ENST00000405271 SAP30O75446 220 aa16.58■□□□□ 0.24
EPCAM-202ENST00000405271 BCL2P10415 239 aa16.58■□□□□ 0.24
EPCAM-202ENST00000405271 RPL11P62913 178 aaKnown RBP16.58■□□□□ 0.24
EPCAM-202ENST00000405271 SAMD13Q5VXD3 122 aa16.58■□□□□ 0.24
EPCAM-202ENST00000405271 PSG9Q00887 426 aa16.57■□□□□ 0.24
EPCAM-202ENST00000405271 DEFB114Q30KQ6 69 aa16.57■□□□□ 0.24
EPCAM-202ENST00000405271 LYPD1Q8N2G4 141 aa16.57■□□□□ 0.24
EPCAM-202ENST00000405271 TRAV25A0A0B4J276 109 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 LOC102723971A0A1B0GUV8 181 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 FAM74A7A6NL05 159 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 PAGE4O60829 102 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 SNRPCP09234 159 aaKnown RBP16.56■□□□□ 0.24
EPCAM-202ENST00000405271 CD33P20138 364 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 UBE2G2P60604 165 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 OR2K2Q8NGT1 345 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 C17orf77Q96MU5 243 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 TXNDC17Q9BRA2 123 aa16.56■□□□□ 0.24
EPCAM-202ENST00000405271 MCRIP2Q9BUT9 160 aaKnown RBP16.56■□□□□ 0.24
EPCAM-202ENST00000405271 NKX6-2Q9C056 277 aaPredicted RBP16.56■□□□□ 0.24
EPCAM-202ENST00000405271 RAB19A4D1S5 217 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 RBFOX3A6NFN3 312 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 H3BTX0 84 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 NDUFB4O95168 129 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 INSL3P51460 131 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 HAGHQ16775 308 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 RBPMS2Q6ZRY4 209 aaKnown RBP16.55■□□□□ 0.24
EPCAM-202ENST00000405271 VAX2Q9UIW0 290 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 YTHDF2Q9Y5A9 579 aaKnown RBP16.55■□□□□ 0.24
EPCAM-202ENST00000405271 SLC17A3O00476 420 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 TOR2AQ5JU69 321 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 ZNF506Q5JVG8 444 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 C9orf66Q5T8R8 295 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 TMEM61Q8N0U2 210 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 WFDC9Q8NEX5 89 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 Q9H3A6 140 aa16.55■□□□□ 0.24
EPCAM-202ENST00000405271 ZNF331Q9NQX6 463 aaPredicted RBP16.55■□□□□ 0.24
EPCAM-202ENST00000405271 TRAV2A0A0B4J234 112 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 TSPAN4O14817 238 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 IGLV1-51P01701 117 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 RANP62826 216 aaKnown RBP16.54■□□□□ 0.24
EPCAM-202ENST00000405271 PAFAH1B2P68402 229 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 CD300EQ496F6 205 aaPredicted RBP16.54■□□□□ 0.24
EPCAM-202ENST00000405271 COMMD7Q86VX2 200 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 EIF5A2Q9GZV4 153 aaKnown RBP16.54■□□□□ 0.24
EPCAM-202ENST00000405271 AAMDCQ9H7C9 122 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 OTORQ9NRC9 128 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 CLEC5AQ9NY25 188 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 SELENOKQ9Y6D0 94 aa16.54■□□□□ 0.24
EPCAM-202ENST00000405271 SOCS3O14543 225 aa16.53■□□□□ 0.24
EPCAM-202ENST00000405271 MEF2BQ02080 365 aaPredicted RBP16.53■□□□□ 0.24
EPCAM-202ENST00000405271 NDUFA5Q16718 116 aa16.53■□□□□ 0.24
EPCAM-202ENST00000405271 CST9LP1Q5W188 147 aa16.53■□□□□ 0.24
EPCAM-202ENST00000405271 DCANP1Q8TF63 244 aa16.53■□□□□ 0.24
EPCAM-202ENST00000405271 MS4A6AQ9H2W1 248 aa16.53■□□□□ 0.24
EPCAM-202ENST00000405271 IGKV3-7A0A075B6H7 116 aa16.52■□□□□ 0.24
EPCAM-202ENST00000405271 GGTLC3B5MD39 225 aa16.52■□□□□ 0.24
EPCAM-202ENST00000405271 C16orf92Q96LL3 132 aa16.52■□□□□ 0.24
EPCAM-202ENST00000405271 SPAG8Q99932 426 aaPredicted RBP16.52■□□□□ 0.24
EPCAM-202ENST00000405271 TCEAL7Q9BRU2 100 aa16.52■□□□□ 0.24
EPCAM-202ENST00000405271 SMDT1Q9H4I9 107 aa16.52■□□□□ 0.24
EPCAM-202ENST00000405271 C11orf94C9JXX5 98 aa16.51■□□□□ 0.23
EPCAM-202ENST00000405271 DNASE2O00115 360 aaPredicted RBP16.51■□□□□ 0.23
EPCAM-202ENST00000405271 ISLRO14498 428 aa16.51■□□□□ 0.23
EPCAM-202ENST00000405271 NDUFS6O75380 124 aaKnown RBP16.51■□□□□ 0.23
EPCAM-202ENST00000405271 ATP5G3P48201 142 aa16.51■□□□□ 0.23
EPCAM-202ENST00000405271 ICAM4Q14773 271 aa16.51■□□□□ 0.23
EPCAM-202ENST00000405271 LCN12Q6JVE5 192 aa16.51■□□□□ 0.23
EPCAM-202ENST00000405271 K7EQG2 157 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 PEA15Q15121 130 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 GBGT1Q8N5D6 347 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 RARRES2Q99969 163 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 PRELID1Q9Y255 219 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 PGPA6NDG6 321 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 ID1P41134 155 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 SUMO1P63165 101 aaKnown RBP16.5■□□□□ 0.23
EPCAM-202ENST00000405271 UQCC3Q6UW78 93 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 CCDC28AQ8IWP9 274 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 EXOC3-AS1Q8N2X6 119 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 EIF4E3Q8N5X7 224 aaKnown RBP16.5■□□□□ 0.23
EPCAM-202ENST00000405271 C5orf17Q8NAS9 161 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 RXFP4Q8TDU9 374 aa16.5■□□□□ 0.23
EPCAM-202ENST00000405271 TRAV8-2A0A0B4J237 113 aa16.49■□□□□ 0.23
EPCAM-202ENST00000405271 MRPL53Q96EL3 112 aaKnown RBP16.49■□□□□ 0.23
EPCAM-202ENST00000405271 GPR61Q9BZJ8 451 aa16.49■□□□□ 0.23
EPCAM-202ENST00000405271 OR4C46A6NHA9 309 aa16.48■□□□□ 0.23
EPCAM-202ENST00000405271 F6UZH7 168 aa16.48■□□□□ 0.23
EPCAM-202ENST00000405271 PDE6DO43924 150 aa16.48■□□□□ 0.23
EPCAM-202ENST00000405271 SLC25A5P05141 298 aaKnown RBP16.48■□□□□ 0.23
EPCAM-202ENST00000405271 CD81P60033 236 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms