RNA–Protein interactions for RNA: ENST00000404484.8

TPM1-208, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-208ENST00000404484 PGPA6NDG6 321 aa16.08■□□□□ 0.16
TPM1-208ENST00000404484 K7EMT4 169 aa16.08■□□□□ 0.16
TPM1-208ENST00000404484 SLC25A5P05141 298 aaKnown RBP16.08■□□□□ 0.16
TPM1-208ENST00000404484 PSG9Q00887 426 aa16.08■□□□□ 0.16
TPM1-208ENST00000404484 UNQ9165/PRO28630Q6UXU0 137 aa16.08■□□□□ 0.16
TPM1-208ENST00000404484 LINC01006Q8NI28 216 aa16.08■□□□□ 0.16
TPM1-208ENST00000404484 ZNF747Q9BV97 191 aa16.08■□□□□ 0.16
TPM1-208ENST00000404484 DAZ1Q9NQZ3 744 aaKnown RBP16.08■□□□□ 0.16
TPM1-208ENST00000404484 UFC1Q9Y3C8 167 aa16.08■□□□□ 0.16
TPM1-208ENST00000404484 A0A087X0K7 114 aa16.07■□□□□ 0.16
TPM1-208ENST00000404484 PEX7O00628 323 aa16.07■□□□□ 0.16
TPM1-208ENST00000404484 ZNF207O43670 478 aaKnown RBP16.07■□□□□ 0.16
TPM1-208ENST00000404484 SCO1O75880 301 aa16.07■□□□□ 0.16
TPM1-208ENST00000404484 SNRPCP09234 159 aaKnown RBP16.07■□□□□ 0.16
TPM1-208ENST00000404484 BMI1P35226 326 aa16.07■□□□□ 0.16
TPM1-208ENST00000404484 C2CD4CQ8TF44 421 aa16.07■□□□□ 0.16
TPM1-208ENST00000404484 AAMDCQ9H7C9 122 aa16.07■□□□□ 0.16
TPM1-208ENST00000404484 EPDR1Q9UM22 224 aa16.07■□□□□ 0.16
TPM1-208ENST00000404484 A0A1B0GUS0 222 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 C9JCJ5 164 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 H3BTX0 84 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 HAX1O00165 279 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 AKR1C3P42330 323 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 CNN1P51911 297 aaKnown RBP16.06■□□□□ 0.16
TPM1-208ENST00000404484 CMTM2Q8TAZ6 248 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 WIPF2Q8TF74 440 aaPredicted RBP16.06■□□□□ 0.16
TPM1-208ENST00000404484 C4orf3Q8WVX3 66 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 DERL1Q9BUN8 251 aa16.06■□□□□ 0.16
TPM1-208ENST00000404484 C7orf77A4D0Y5 90 aa16.05■□□□□ 0.16
TPM1-208ENST00000404484 HELTA6NFD8 242 aa16.05■□□□□ 0.16
TPM1-208ENST00000404484 RPL35P42766 123 aaKnown RBP16.05■□□□□ 0.16
TPM1-208ENST00000404484 C16orf54Q6UWD8 224 aa16.05■□□□□ 0.16
TPM1-208ENST00000404484 SIGLEC15Q6ZMC9 328 aa16.05■□□□□ 0.16
TPM1-208ENST00000404484 ATG101Q9BSB4 218 aa16.05■□□□□ 0.16
TPM1-208ENST00000404484 PRELID1Q9Y255 219 aa16.05■□□□□ 0.16
TPM1-208ENST00000404484 TRRAPQ9Y4A5 3859 aa16.05■□□□□ 0.16
TPM1-208ENST00000404484 ZNF785A8K8V0 405 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 S100A9P06702 114 aaKnown RBP16.04■□□□□ 0.16
TPM1-208ENST00000404484 KHDC1LQ5JSQ8 128 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 REC114Q7Z4M0 266 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 RPS10P5Q9NQ39 176 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 RNF114Q9Y508 228 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 LY96Q9Y6Y9 160 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 TAS2R60P59551 318 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 ADIRFQ15847 76 aa16.04■□□□□ 0.16
TPM1-208ENST00000404484 IGHV4OR15-8A0A075B7B6 117 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 A0A087WW49 117 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 A0A087WWC5 75 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 IGHV3-66A0A0C4DH42 116 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 IGHV7-4-1A0A0J9YVY3 117 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 LGALS9O00182 355 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 APOHP02749 345 aaPredicted RBP16.03■□□□□ 0.16
TPM1-208ENST00000404484 RPL23P62829 140 aaKnown RBP16.03■□□□□ 0.16
TPM1-208ENST00000404484 TCTEX1D4Q5JR98 221 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 ARL6IP6Q8N6S5 226 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 GLMPQ8WWB7 406 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 C17orf77Q96MU5 243 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 SLC50A1Q9BRV3 221 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 SMAD5-AS1Q9Y6J3 95 aa16.03■□□□□ 0.16
TPM1-208ENST00000404484 IGHV3-49A0A0A0MS15 119 aa16.02■□□□□ 0.16
TPM1-208ENST00000404484 GNG4P50150 75 aa16.02■□□□□ 0.16
TPM1-208ENST00000404484 BTN1A1Q13410 526 aa16.02■□□□□ 0.16
TPM1-208ENST00000404484 SHISA2Q6UWI4 295 aa16.02■□□□□ 0.16
TPM1-208ENST00000404484 IGHV3OR16-13A0A075B7E8 117 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 IGHV3-74A0A0B4J1X5 117 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 A8MWP6 167 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 SLC17A3O00476 420 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 TCRAP04437 139 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 HOXD3P31249 432 aaPredicted RBP16.01■□□□□ 0.15
TPM1-208ENST00000404484 CSN1S1P47710 185 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 PROK1P58294 105 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 C1QL4Q86Z23 238 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 EXOC3-AS1Q8N2X6 119 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 DPF1Q92782 380 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 SMPXQ9UHP9 88 aa16.01■□□□□ 0.15
TPM1-208ENST00000404484 SERTM2A0A1B0GWG4 89 aa16■□□□□ 0.15
TPM1-208ENST00000404484 LINC01619G3V211 115 aa16■□□□□ 0.15
TPM1-208ENST00000404484 K7EQM0 130 aa16■□□□□ 0.15
TPM1-208ENST00000404484 KRTAP10-3P60369 221 aa16■□□□□ 0.15
TPM1-208ENST00000404484 UBE2G1P62253 170 aa16■□□□□ 0.15
TPM1-208ENST00000404484 GNG5P63218 68 aa16■□□□□ 0.15
TPM1-208ENST00000404484 TM4SF20Q53R12 229 aa16■□□□□ 0.15
TPM1-208ENST00000404484 CENPWQ5EE01 88 aa16■□□□□ 0.15
TPM1-208ENST00000404484 LINC01551Q86U37 167 aa16■□□□□ 0.15
TPM1-208ENST00000404484 KLHL30-AS1Q8NEE0 82 aa16■□□□□ 0.15
TPM1-208ENST00000404484 SMCO4Q9NRQ5 59 aa16■□□□□ 0.15
TPM1-208ENST00000404484 CLEC5AQ9NY25 188 aa16■□□□□ 0.15
TPM1-208ENST00000404484 TRBV20OR9-2A0A075B6H5 130 aa16■□□□□ 0.15
TPM1-208ENST00000404484 MT-ND4LP03901 98 aa16■□□□□ 0.15
TPM1-208ENST00000404484 TMEM183BQ1AE95 376 aa16■□□□□ 0.15
TPM1-208ENST00000404484 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16■□□□□ 0.15
TPM1-208ENST00000404484 FMC1Q96HJ9 113 aa16■□□□□ 0.15
TPM1-208ENST00000404484 RHPN1-AS1Q9BWJ2 59 aa16■□□□□ 0.15
TPM1-208ENST00000404484 RPH3ALQ9UNE2 315 aa16■□□□□ 0.15
TPM1-208ENST00000404484 KLF12Q9Y4X4 402 aa16■□□□□ 0.15
TPM1-208ENST00000404484 TSPAN4O14817 238 aa15.99■□□□□ 0.15
TPM1-208ENST00000404484 CTDSP1Q9GZU7 261 aa15.99■□□□□ 0.15
TPM1-208ENST00000404484 ZNF331Q9NQX6 463 aaPredicted RBP15.99■□□□□ 0.15
TPM1-208ENST00000404484 CHEK1O14757 476 aa15.98■□□□□ 0.15
TPM1-208ENST00000404484 OR1N2Q8NGR9 330 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms