RNA–Protein interactions for RNA: ENST00000403408.2

SPTLC1P3-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 3, humanhuman

BASIC

Gene SPTLC1P3, Length 259 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P3-201ENST00000403408 TNFAIP8O95379 198 aa8.01□□□□□ -1.13
SPTLC1P3-201ENST00000403408 FABP1P07148 127 aa8.01□□□□□ -1.13
SPTLC1P3-201ENST00000403408 SNRPCP09234 159 aaKnown RBP8.01□□□□□ -1.13
SPTLC1P3-201ENST00000403408 VBP1P61758 197 aa8.01□□□□□ -1.13
SPTLC1P3-201ENST00000403408 RPUSD4Q96CM3 377 aaKnown RBP8.01□□□□□ -1.13
SPTLC1P3-201ENST00000403408 SHANK2-AS3Q9BTD1 123 aa8.01□□□□□ -1.13
SPTLC1P3-201ENST00000403408 TNXBP22105 4242 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 A0A087X0K7 114 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 A0A0B4J2A0 478 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 LRCOL1A6NCL2 159 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 RLN2P04090 185 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 TAS2R19P59542 299 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 GGNBP1Q5YKI7 109 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 PATE2Q6UY27 113 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 C11orf72Q8NBR9 251 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 GPR82Q96P67 336 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 TMEM70Q9BUB7 260 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 TMEM147Q9BVK8 224 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 EXTL2Q9UBQ6 330 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 SHPKQ9UHJ6 478 aa8□□□□□ -1.13
SPTLC1P3-201ENST00000403408 FAM25AB3EWG3 89 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 FAM25CB3EWG5 89 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 FAM25GB3EWG6 89 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 J3KRW8 73 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 CFDP00746 253 aaPredicted RBP7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 ATP5IP56385 69 aaPredicted RBP7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 KRTAP10-4P60372 401 aaPredicted RBP7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 DAZ2Q13117 558 aaKnown RBP7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 SURF2Q15527 256 aaPredicted RBP7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 LYPD5Q6UWN5 251 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 WFDC10BQ8IUB3 73 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 BPIFCQ8NFQ6 507 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 MIXL1Q9H2W2 232 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 GSN-AS1Q9NRJ2 163 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 PPP1R14DQ9NXH3 145 aa7.99□□□□□ -1.13
SPTLC1P3-201ENST00000403408 SLC17A3O00476 420 aa7.98□□□□□ -1.13
SPTLC1P3-201ENST00000403408 ADAP1O75689 374 aa7.98□□□□□ -1.13
SPTLC1P3-201ENST00000403408 CT45A10P0DMU9 189 aa7.98□□□□□ -1.13
SPTLC1P3-201ENST00000403408 OR1S1Q8NH92 325 aa7.98□□□□□ -1.13
SPTLC1P3-201ENST00000403408 C20orf144Q9BQM9 153 aa7.98□□□□□ -1.13
SPTLC1P3-201ENST00000403408 MSRB1Q9NZV6 116 aa7.98□□□□□ -1.13
SPTLC1P3-201ENST00000403408 PAIP2BQ9ULR5 123 aaKnown RBP7.98□□□□□ -1.13
SPTLC1P3-201ENST00000403408 TRAV12-3A0A0B4J271 114 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 PMS2P5A8MQ11 134 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 SNURFLB1AK76 121 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 H3BTX0 84 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 ZNF324O75467 553 aaPredicted RBP7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 RPL7P18124 248 aaKnown RBP7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 SERTAD4-AS1Q5TG53 156 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 TEPPQ6URK8 271 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 CYP2G1PQ6ZSU1 146 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 ACOT7LQ6ZUV0 252 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 NFE4Q86UQ8 179 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 CCDC28AQ8IWP9 274 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 OR51S1Q8NGJ8 323 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 ZNF431Q8TF32 576 aaPredicted RBP7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 LINC00467Q9BRT7 94 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 FUNDC2Q9BWH2 189 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 NAA50Q9GZZ1 169 aaKnown RBP7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 ZNF331Q9NQX6 463 aaPredicted RBP7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 CACFD1Q9UGQ2 172 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 KLF12Q9Y4X4 402 aa7.97□□□□□ -1.13
SPTLC1P3-201ENST00000403408 IGLV5-52A0A0A0MRZ9 124 aa7.96□□□□□ -1.14
SPTLC1P3-201ENST00000403408 IGHV3-53P01767 116 aa7.96□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PLP1P60201 277 aa7.96□□□□□ -1.14
SPTLC1P3-201ENST00000403408 RAB11AP62491 216 aa7.96□□□□□ -1.14
SPTLC1P3-201ENST00000403408 MORN5Q5VZ52 161 aa7.96□□□□□ -1.14
SPTLC1P3-201ENST00000403408 Q6ZQT7 251 aa7.96□□□□□ -1.14
SPTLC1P3-201ENST00000403408 HIGD1AQ9Y241 93 aa7.96□□□□□ -1.14
SPTLC1P3-201ENST00000403408 TRGV2A0A075B6R0 118 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 TRGV1A0A0A0MS02 117 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 DISC1C4P0D8 188 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 H3BP45 60 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PAX4O43316 350 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 HYPMO75409 117 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CCNKO75909 580 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 AKR1C4P17516 323 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CRYBA4P53673 196 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CCDC190Q86UF4 302 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 FUT9Q9Y231 359 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ICOSQ9Y6W8 199 aa7.95□□□□□ -1.14
SPTLC1P3-201ENST00000403408 WRBO00258 174 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 SPINK4O60575 86 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PRAF2O60831 178 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 LINC00869P0C866 280 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 AKR1C1Q04828 323 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 FHL2Q14192 279 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 WFDC2Q14508 124 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 C4orf48Q5BLP8 95 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 Q6ZSA8 131 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 C8orf49Q96NF6 230 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 TP53TG3Q9ULZ0 132 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 PLA2G2DQ9UNK4 145 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 KCNIP3Q9Y2W7 256 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 LY96Q9Y6Y9 160 aa7.94□□□□□ -1.14
SPTLC1P3-201ENST00000403408 NPIPB6E9PJ23 425 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 H3BQ15 152 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 CTDSP2O14595 271 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 ATP6V1G2O95670 118 aa7.93□□□□□ -1.14
SPTLC1P3-201ENST00000403408 IL5P05113 134 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms