RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 DEFB130BP0DP73 79 aa11.33□□□□□ -0.59
RERE-204ENST00000400908 DEFB130AP0DP74 79 aa11.33□□□□□ -0.59
RERE-204ENST00000400908 GAS1P54826 345 aa11.33□□□□□ -0.59
RERE-204ENST00000400908 MDS2Q8NDY4 140 aa11.33□□□□□ -0.59
RERE-204ENST00000400908 TRBV25-1A0A075B6N4 114 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 PRB1P04280 392 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 ATP1A1-AS1Q5TC04 95 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 C20orf144Q9BQM9 153 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 SRSF8Q9BRL6 282 aaKnown RBP11.33□□□□□ -0.6
RERE-204ENST00000400908 PRO1854Q9UHT4 67 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 RHODO00212 210 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 RS1O15537 224 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 COL4A6Q14031 1691 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 LYPD1Q8N2G4 141 aa11.33□□□□□ -0.6
RERE-204ENST00000400908 F6UB75 175 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 SRSF7Q16629 238 aaKnown RBP eCLIP11.32□□□□□ -0.65e-7■■■■□ 23.5
RERE-204ENST00000400908 PPP1R32Q7Z5V6 425 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 SMIM20Q8N5G0 67 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 C8orf31Q8N9H6 132 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 TSC2P49815 1807 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 FAM104BQ5XKR9 115 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 C19orf48Q6RUI8 117 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 TRBV7-1A0A0A6YYK4 115 aa11.32□□□□□ -0.6
RERE-204ENST00000400908 SNRNP200O75643 2136 aaKnown RBP11.32□□□□□ -0.6
RERE-204ENST00000400908 IGHV1-24A0A0C4DH33 117 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 J3KT08 172 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 POLR3KQ9Y2Y1 108 aaPredicted RBP11.31□□□□□ -0.6
RERE-204ENST00000400908 SEC61GP60059 68 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 THBDP07204 575 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 IGHV1-2P23083 117 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 NDPQ00604 133 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 C2orf66Q6UXQ4 117 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 CHCHD2Q9Y6H1 151 aaPredicted RBP11.31□□□□□ -0.6
RERE-204ENST00000400908 A0A1W2PPM0 123 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 CRYGCP07315 174 aa11.31□□□□□ -0.6
RERE-204ENST00000400908 MRPL55Q7Z7F7 128 aaKnown RBP11.31□□□□□ -0.6
RERE-204ENST00000400908 CLPSP04118 112 aa11.3□□□□□ -0.6
RERE-204ENST00000400908 NDUFA12Q9UI09 145 aa11.3□□□□□ -0.6
RERE-204ENST00000400908 I3L3M4 83 aa11.3□□□□□ -0.6
RERE-204ENST00000400908 RNF166Q96A37 237 aaPredicted RBP11.3□□□□□ -0.6
RERE-204ENST00000400908 LINC00114Q6XXX2 140 aa11.3□□□□□ -0.6
RERE-204ENST00000400908 HLA-DMBP28068 263 aa11.3□□□□□ -0.6
RERE-204ENST00000400908 GLRX5Q86SX6 157 aa11.3□□□□□ -0.6
RERE-204ENST00000400908 RMI2Q96E14 147 aa11.3□□□□□ -0.6
RERE-204ENST00000400908 IGKV1D-43A0A0B4J1Z2 117 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 RFPL3SP0C7P2 107 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 BTCP35070 178 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 Q0VG73 95 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 NTN5Q8WTR8 489 aaPredicted RBP11.29□□□□□ -0.6
RERE-204ENST00000400908 ARMS2P0C7Q2 107 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 ZNF318Q5VUA4 2279 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 Q8N8P6 123 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 WBP1Q96G27 269 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 C14orf132Q9NPU4 83 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 MSRB2Q9Y3D2 182 aa11.29□□□□□ -0.6
RERE-204ENST00000400908 PRSS29PA6NIE9 313 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 ACYP1P07311 99 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 IL17RELQ6ZVW7 336 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 NLRC5Q86WI3 1866 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 C22orf46C9J442 243 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 CELA3BP08861 270 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 C10orf55Q5SWW7 151 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 Q86TA4 180 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 SIGLEC12Q96PQ1 595 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 CELA3AP09093 270 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 NPSP0C0P6 89 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 ZNF883P0CG24 379 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 IGLC2P0DOY2 106 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 IGLC3P0DOY3 106 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 FUSP35637 526 aaKnown RBP eCLIP11.28□□□□□ -0.62e-6■■■□□ 15.1
RERE-204ENST00000400908 CEND1Q8N111 149 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 ORMDL1Q9P0S3 153 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 A0A1B0GX51 115 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 ZDBF2Q9HCK1 2354 aa11.28□□□□□ -0.6
RERE-204ENST00000400908 AHCTF1Q8WYP5 2266 aa11.27□□□□□ -0.6
RERE-204ENST00000400908 F5H768 121 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 RPP25LQ8N5L8 163 aaKnown RBP11.27□□□□□ -0.61
RERE-204ENST00000400908 TMEM105Q8N8V8 129 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 RNASE6Q93091 150 aaKnown RBP11.27□□□□□ -0.61
RERE-204ENST00000400908 RNF5Q99942 180 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 RP1P56715 2156 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 H3BMG7 143 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 PRSS57Q6UWY2 283 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 SPATA25Q9BR10 227 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 IGHV2-26A0A0B4J1V2 119 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 NDUFB1O75438 58 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 ZNF329Q86UD4 541 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 USMG5Q96IX5 58 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 PTPRDP23468 1912 aa11.27□□□□□ -0.61
RERE-204ENST00000400908 APC2O95996 2303 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 MRPL14Q6P1L8 145 aaKnown RBP11.26□□□□□ -0.61
RERE-204ENST00000400908 BRK1Q8WUW1 75 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 IGFL4Q6B9Z1 124 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 PIP4P2Q8N4L2 257 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 DAD1P61803 113 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 UBE2BP63146 152 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 IGLV3-12A0A075B6K2 115 aa11.26□□□□□ -0.61
RERE-204ENST00000400908 CFHR1Q03591 330 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms