RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 GBF1Q92538 1859 aa13.09□□□□□ -0.31
ITSN1-209ENST00000399352 COL4A5P29400 1685 aa13.09□□□□□ -0.31
ITSN1-209ENST00000399352 ATP6V0BQ99437 205 aa13.09□□□□□ -0.31
ITSN1-209ENST00000399352 TP53TG1Q9Y2A0 90 aa13.09□□□□□ -0.31
ITSN1-209ENST00000399352 TRBV6-6A0A0A6YYG2 114 aa13.09□□□□□ -0.31
ITSN1-209ENST00000399352 IGKV1-16P04430 117 aa13.09□□□□□ -0.31
ITSN1-209ENST00000399352 GAGE12HA6NDE8 117 aa13.09□□□□□ -0.31
ITSN1-209ENST00000399352 VMO1Q7Z5L0 202 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 ANAPC10Q9UM13 185 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 FANCMQ8IYD8 2048 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 F8W1H4 67 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 SIGLEC9Q9Y336 463 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 TRBV20-1A0A075B6N2 111 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 AZU1P20160 251 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 BVES-AS1Q5T3Y7 98 aa13.08□□□□□ -0.32
ITSN1-209ENST00000399352 SRSF8Q9BRL6 282 aaKnown RBP13.08□□□□□ -0.32
ITSN1-209ENST00000399352 IGHV1-24A0A0C4DH33 117 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 LTBRP36941 435 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 C5orf64Q2M2E5 130 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 ZNF672Q499Z4 452 aaPredicted RBP13.07□□□□□ -0.32
ITSN1-209ENST00000399352 C2orf66Q6UXQ4 117 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 H3BMG7 143 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 K7ERJ3 54 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 IFITM1P13164 125 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 MRAPQ8TCY5 172 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 C8orf49Q96NF6 230 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 DTX2Q86UW9 622 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 IL18BPO95998 194 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 COX8AP10176 69 aa13.07□□□□□ -0.32
ITSN1-209ENST00000399352 SOCS3O14543 225 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 IGLV3-19P01714 112 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 FAM104BQ5XKR9 115 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 NEGR1Q7Z3B1 354 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 ATAD5Q96QE3 1844 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 A0A1W2PPM0 123 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 ZNF726P1Q15940 193 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 HS3ST6Q96QI5 342 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 FGF6P10767 208 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 AMTNQ6UX39 209 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 Q6ZVH6 145 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 UBE2E2Q96LR5 201 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 SPANXA1Q9NS26 97 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 PI4KAP42356 2102 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 COL24A1Q17RW2 1714 aa13.06□□□□□ -0.32
ITSN1-209ENST00000399352 IGKV1D-17A0A075B6S4 117 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 TMEM178BH3BS89 294 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 CFHR1Q03591 330 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 VWC2Q2TAL6 325 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 ASPHD1Q5U4P2 390 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 ZNF114Q8NC26 417 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 CDK2AP2O75956 126 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 SHANK2-AS3Q9BTD1 123 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 IGKV1-6A0A0C4DH72 117 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 F8WEM9 126 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 INAFM2P0DMQ5 153 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 KNCNA6PVL3 124 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 NSUN5P1Q3KNT7 163 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 CDPF1Q6NVV7 123 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 Q6ZS49 121 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 GAFA1Q96PS6 74 aa13.05□□□□□ -0.32
ITSN1-209ENST00000399352 ZNRD1Q9P1U0 126 aa13.04□□□□□ -0.32
ITSN1-209ENST00000399352 ZNF492Q9P255 531 aa13.04□□□□□ -0.32
ITSN1-209ENST00000399352 ATRXP46100 2492 aa13.04□□□□□ -0.32
ITSN1-209ENST00000399352 V9GYV3 84 aa13.04□□□□□ -0.32
ITSN1-209ENST00000399352 YPEL3P61236 119 aaPredicted RBP13.04□□□□□ -0.32
ITSN1-209ENST00000399352 PSME4Q14997 1843 aa13.04□□□□□ -0.32
ITSN1-209ENST00000399352 PMVKQ15126 192 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 TRAV26-2A0A0B4J265 109 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 E9PLN8 166 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 BUB1B-PAK6H3BSN5 160 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 SAP30O75446 220 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 DKK1O94907 266 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 RPL35AP18077 110 aaKnown RBP13.03□□□□□ -0.32
ITSN1-209ENST00000399352 PAX9P55771 341 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 BRD3OSQ6XYD6 125 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 RHPN1-AS1Q9BWJ2 59 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 TRBV7-1A0A0A6YYK4 115 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 CLPSP04118 112 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 C10orf91Q5T1B1 145 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 RNF5Q99942 180 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 ADAMTS7Q9UKP4 1686 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 A0A1W2PPI3 338 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 HAMPP81172 84 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 Q8N8P6 123 aa13.03□□□□□ -0.32
ITSN1-209ENST00000399352 MRPL51Q4U2R6 128 aaKnown RBP13.03□□□□□ -0.32
ITSN1-209ENST00000399352 PRSS46E5RG02 174 aa13.02□□□□□ -0.32
ITSN1-209ENST00000399352 FNDC10F2Z333 226 aa13.02□□□□□ -0.32
ITSN1-209ENST00000399352 ZNF883P0CG24 379 aa13.02□□□□□ -0.32
ITSN1-209ENST00000399352 WIPF3A6NGB9 483 aa13.02□□□□□ -0.33
ITSN1-209ENST00000399352 SPTAN1Q13813 2472 aaKnown RBP13.02□□□□□ -0.33
ITSN1-209ENST00000399352 MRPL35Q9NZE8 188 aaKnown RBP13.02□□□□□ -0.33
ITSN1-209ENST00000399352 PFN2P35080 140 aa13.02□□□□□ -0.33
ITSN1-209ENST00000399352 TMEM75Q8N9X5 138 aa13.01□□□□□ -0.33
ITSN1-209ENST00000399352 UBR3Q6ZT12 1888 aa13.01□□□□□ -0.33
ITSN1-209ENST00000399352 H3BUX3 64 aa13.01□□□□□ -0.33
ITSN1-209ENST00000399352 TRPT1Q86TN4 253 aaKnown RBP13.01□□□□□ -0.33
ITSN1-209ENST00000399352 PHF3Q92576 2039 aaKnown RBP13.01□□□□□ -0.33
ITSN1-209ENST00000399352 NCOR1P1Q9H4R4 102 aa13.01□□□□□ -0.33
ITSN1-209ENST00000399352 TRACP01848 142 aa13.01□□□□□ -0.33
ITSN1-209ENST00000399352 SUMO4Q6EEV6 95 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms