RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 ADAMTSL5Q6ZMM2 481 aa6.74□□□□□ -1.33
BRCC3-206ENST00000399042 PQLC2Q6ZP29 291 aa6.74□□□□□ -1.33
BRCC3-206ENST00000399042 ZNF414Q96IQ9 312 aa6.74□□□□□ -1.33
BRCC3-206ENST00000399042 SPAG8Q99932 426 aaPredicted RBP6.74□□□□□ -1.33
BRCC3-206ENST00000399042 SSBP4Q9BWG4 385 aaPredicted RBP6.74□□□□□ -1.33
BRCC3-206ENST00000399042 SLC25A2Q9BXI2 301 aa6.74□□□□□ -1.33
BRCC3-206ENST00000399042 MRPL18Q9H0U6 180 aaKnown RBP6.74□□□□□ -1.33
BRCC3-206ENST00000399042 NRN1Q9NPD7 142 aa6.74□□□□□ -1.33
BRCC3-206ENST00000399042 UBQLN2Q9UHD9 624 aa6.74□□□□□ -1.33
BRCC3-206ENST00000399042 NOTCH3Q9UM47 2321 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 TSPAN4O14817 238 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 HBE1P02100 147 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 ARL14EPLP0DKL9 152 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 HIST1H1EP10412 219 aaKnown RBP6.73□□□□□ -1.33
BRCC3-206ENST00000399042 SULT1A2P50226 295 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 CMC4P56277 68 aaPredicted RBP6.73□□□□□ -1.33
BRCC3-206ENST00000399042 TEX261Q6UWH6 196 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 AAMDCQ9H7C9 122 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 TMEM167BQ9NRX6 74 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 TMEM14CQ9P0S9 112 aa6.73□□□□□ -1.33
BRCC3-206ENST00000399042 ZNF256Q9Y2P7 627 aaPredicted RBP6.73□□□□□ -1.33
BRCC3-206ENST00000399042 IZUMO1RA6ND01 250 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 G3V4G9 280 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 NBEAP1P0C6P0 100 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 STAG3L2P0CL84 134 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 STAG3L3P0CL85 134 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 GCHFRP30047 84 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 CSN1S1P47710 185 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 CD81P60033 236 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 RANP62826 216 aaKnown RBP6.72□□□□□ -1.33
BRCC3-206ENST00000399042 PSG9Q00887 426 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 PSMG4Q5JS54 123 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 ZNF680Q8NEM1 530 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 HRH4Q9H3N8 390 aa6.72□□□□□ -1.33
BRCC3-206ENST00000399042 OR11H12B2RN74 326 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 H3BQ15 152 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 IFNA1P01562 189 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF688P0C7X2 276 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 PPT1P50897 306 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 UBE2G2P60604 165 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 CST9LP1Q5W188 147 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 FAM90A2PQ658T7 463 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 IGFL4Q6B9Z1 124 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF738Q8NE65 137 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 CMTM2Q8TAZ6 248 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 FAM167A-AS1Q96KT0 104 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 PRR25Q96S07 402 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 SLC50A1Q9BRV3 221 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 TUBA4BQ9H853 241 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 PPP1R14DQ9NXH3 145 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF586Q9NXT0 402 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 SMAD5-AS1Q9Y6J3 95 aa6.71□□□□□ -1.34
BRCC3-206ENST00000399042 TRBV19A0A075B6N1 114 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 A0A087X0K7 114 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 TRAV2A0A0B4J234 112 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 ISLRO14498 428 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 IGLC2P0DOY2 106 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 PSMB3P49720 205 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 DEFB131AP59861 70 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 PDE6HQ13956 83 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF726P1Q15940 193 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 EBLN2Q6P2I7 272 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 SSX7Q7RTT5 188 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 RNF182Q8N6D2 247 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 MBD3L1Q8WWY6 194 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 FXYD5Q96DB9 178 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 SAT2Q96F10 170 aaPredicted RBP6.7□□□□□ -1.34
BRCC3-206ENST00000399042 C17orf77Q96MU5 243 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 TMPRSS5Q9H3S3 457 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 CLEC5AQ9NY25 188 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 GNG13Q9P2W3 67 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 RPH3ALQ9UNE2 315 aa6.7□□□□□ -1.34
BRCC3-206ENST00000399042 TMA7Q9Y2S6 64 aaKnown RBP6.7□□□□□ -1.34
BRCC3-206ENST00000399042 PGPA6NDG6 321 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 K7EQG2 157 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 ICAM4Q14773 271 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF767PQ75MW2 155 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 EXOC3-AS1Q8N2X6 119 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 DCANP1Q8TF63 244 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 PCNPQ8WW12 178 aaKnown RBP6.69□□□□□ -1.34
BRCC3-206ENST00000399042 Q9H3A6 140 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 OTORQ9NRC9 128 aa6.69□□□□□ -1.34
BRCC3-206ENST00000399042 K7EQM0 130 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 SLC17A3O00476 420 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 MRPS12O15235 138 aaKnown RBP6.68□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF253O75346 499 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 SLC25A5P05141 298 aaKnown RBP6.68□□□□□ -1.34
BRCC3-206ENST00000399042 CD7P09564 240 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 SUMO1P63165 101 aaKnown RBP6.68□□□□□ -1.34
BRCC3-206ENST00000399042 PSG3Q16557 428 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 DEFB121Q5J5C9 76 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 ACTL10Q5JWF8 245 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 APRG1Q8IVJ8 170 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 STHQ8IWL8 128 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 LYPD1Q8N2G4 141 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 OR10J6PQ8NGY7 276 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 RXFP4Q8TDU9 374 aa6.68□□□□□ -1.34
BRCC3-206ENST00000399042 RPUSD4Q96CM3 377 aaKnown RBP6.68□□□□□ -1.34
BRCC3-206ENST00000399042 ZNF503Q96F45 646 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms