RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 ZNF329Q86UD4 541 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 NIT1Q86X76 327 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 FAM168AQ92567 244 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 OSTCQ9NRP0 149 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 Q9UFV3 132 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 PLXNA4Q9HCM2 1894 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV3-35A0A0C4DH35 117 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 HOXA3O43365 443 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 HOXD3P31249 432 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 SLC25A48Q6ZT89 311 aaKnown RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TEX48A0A1B0GUV7 120 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 CEACAM8P31997 349 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM136Q6ZRR5 245 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 Q6ZS92 163 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TNRC6AQ8NDV7 1962 aaKnown RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 DMXL2Q8TDJ6 3036 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV3OR16-8A0A075B7F1 116 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM178BH3BS89 294 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TFPI2P48307 235 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 KLRD1Q13241 179 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 COX19Q49B96 90 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TEN1Q86WV5 123 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 PMCHL2Q9BQD1 86 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 MIEN1Q9BRT3 115 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 EPDR1Q9UM22 224 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 PTPRSQ13332 1948 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TM4SF20Q53R12 229 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 Q6ZWC4 215 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 OR8A1Q8NGG7 326 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 RITA1Q96K30 269 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 CHRDL1Q9BU40 450 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 CTSZQ9UBR2 303 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 V9GYV3 84 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 A0A1B0GWB2 263 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 A0A1W2PRE2 83 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 BRS3P32247 399 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 RNASE6Q93091 150 aaKnown RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 MCRIP2Q9BUT9 160 aaKnown RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 MRPL36Q9P0J6 103 aaKnown RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 TM4SF5O14894 197 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 C3orf79P0CE67 100 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 COL8A1P27658 744 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 LOXP28300 417 aaPredicted RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 LGALS7P47929 136 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 GUSBP1Q15486 140 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 IGFL2Q6UWQ7 119 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 OR4A5Q8NH83 315 aa3.99□□□□□ -1.77
SMAD4-202ENST00000398417 SRSF12Q8WXF0 261 aaKnown RBP3.99□□□□□ -1.77
SMAD4-202ENST00000398417 MGAQ8IWI9 3026 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 IGLV3-9A0A075B6K5 115 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 GGTLC3B5MD39 225 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 DPM2O94777 84 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TBR1Q16650 682 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 C1orf194Q5T5A4 169 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 GOLT1AQ6ZVE7 132 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TRBV20OR9-2A0A075B6H5 130 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV3OR16-10A0A075B7F0 116 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 ISLRO14498 428 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 HIST1H1EP10412 219 aaKnown RBP3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TDGF1P3P51864 188 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TEX45Q8NA69 505 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 METTL26Q96S19 204 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TRAV8-2A0A0B4J237 113 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TCRBV4S1A1TA0A5B7 111 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 NBEAP1P0C6P0 100 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 PMCHL1Q16048 86 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 CIARTQ8N365 385 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TMEM158Q8WZ71 300 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 SLC25A2Q9BXI2 301 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 ZFP30Q9Y2G7 519 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 C9JCJ5 164 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 TEX29Q8N6K0 151 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 ZNF503Q96F45 646 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 SNHG12Q9BXW3 62 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 Q9H3A6 140 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 PRSS46E5RG02 174 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 CCL21O00585 134 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 DLEU1O43261 78 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 ASCL5Q7RTU5 278 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 OR5AN1Q8NGI8 311 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 LAMTOR2Q9Y2Q5 125 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 NUP210Q8TEM1 1887 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-202ENST00000398417 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-202ENST00000398417 RPP21Q9H633 154 aaKnown RBP3.98□□□□□ -1.77
SMAD4-202ENST00000398417 FNDC4Q9H6D8 234 aaPredicted RBP3.98□□□□□ -1.77
SMAD4-202ENST00000398417 ZNF257Q9Y2Q1 563 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 F8P00451 2351 aa3.98□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV3-66A0A0C4DH42 116 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 ZNF324O75467 553 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-202ENST00000398417 HLA-DQA1P01909 254 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 IGHV1-8P0DP01 117 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 CLEC2AQ6UVW9 174 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 Q8N7P7 452 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 DUX5Q96PT3 197 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 E7EQL1 145 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 LY6HO94772 140 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 LINC00614P0C842 121 aa3.97□□□□□ -1.77
SMAD4-202ENST00000398417 LGALS3P17931 250 aaKnown RBP3.97□□□□□ -1.77
SMAD4-202ENST00000398417 KLF17Q5JT82 389 aaPredicted RBP3.97□□□□□ -1.77
SMAD4-202ENST00000398417 ZNF833PQ6ZTB9 187 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms