RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 KRTAP10-11P60412 298 aa17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 UBE2L3P68036 154 aaKnown RBP17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 TEX261Q6UWH6 196 aa17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 DCANP1Q8TF63 244 aa17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 FXYD5Q96DB9 178 aa17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 MAP1LC3BQ9GZQ8 125 aa17.67■□□□□ 0.42
TSPAN4-203ENST00000397397 FGF8P55075 233 aaPredicted RBP17.66■□□□□ 0.42
TSPAN4-203ENST00000397397 GUK1Q16774 197 aa17.66■□□□□ 0.42
TSPAN4-203ENST00000397397 BEAN1Q3B7T3 259 aa17.66■□□□□ 0.42
TSPAN4-203ENST00000397397 LRRC20Q8TCA0 184 aa17.66■□□□□ 0.42
TSPAN4-203ENST00000397397 BLNKQ8WV28 456 aa17.66■□□□□ 0.42
TSPAN4-203ENST00000397397 H2AFB1P0C5Y9 115 aa17.65■□□□□ 0.42
TSPAN4-203ENST00000397397 NBEAP1P0C6P0 100 aa17.65■□□□□ 0.42
TSPAN4-203ENST00000397397 GCHFRP30047 84 aa17.65■□□□□ 0.42
TSPAN4-203ENST00000397397 IQCF2Q8IXL9 164 aa17.65■□□□□ 0.42
TSPAN4-203ENST00000397397 SFT2D1Q8WV19 159 aa17.65■□□□□ 0.42
TSPAN4-203ENST00000397397 MBD3L1Q8WWY6 194 aa17.65■□□□□ 0.42
TSPAN4-203ENST00000397397 C16orf92Q96LL3 132 aa17.65■□□□□ 0.42
TSPAN4-203ENST00000397397 ZNF705EA8MWA4 302 aaPredicted RBP17.64■□□□□ 0.42
TSPAN4-203ENST00000397397 SOCS3O14543 225 aa17.64■□□□□ 0.42
TSPAN4-203ENST00000397397 SAMD13Q5VXD3 122 aa17.64■□□□□ 0.42
TSPAN4-203ENST00000397397 FAM24BQ8N5W8 94 aa17.64■□□□□ 0.42
TSPAN4-203ENST00000397397 SORL1Q92673 2214 aa17.64■□□□□ 0.41
TSPAN4-203ENST00000397397 TRBV19A0A075B6N1 114 aa17.64■□□□□ 0.41
TSPAN4-203ENST00000397397 ID1P41134 155 aa17.64■□□□□ 0.41
TSPAN4-203ENST00000397397 ZNF680Q8NEM1 530 aa17.64■□□□□ 0.41
TSPAN4-203ENST00000397397 PRR25Q96S07 402 aa17.64■□□□□ 0.41
TSPAN4-203ENST00000397397 A0A1B0GV50 99 aa17.63■□□□□ 0.41
TSPAN4-203ENST00000397397 SLC17A3O00476 420 aa17.63■□□□□ 0.41
TSPAN4-203ENST00000397397 IFNA7P01567 189 aa17.63■□□□□ 0.41
TSPAN4-203ENST00000397397 ISLRO14498 428 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 CD7P09564 240 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 ZNF688P0C7X2 276 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 PSMB3P49720 205 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 CD81P60033 236 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 KPRPQ5T749 579 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 IGFL4Q6B9Z1 124 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 GTSCR1Q86UQ5 136 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 SAT2Q96F10 170 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 SLC50A1Q9BRV3 221 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 TMPRSS5Q9H3S3 457 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 TMEM167BQ9NRX6 74 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 UBQLN2Q9UHD9 624 aa17.62■□□□□ 0.41
TSPAN4-203ENST00000397397 TRAV8-2A0A0B4J237 113 aa17.61■□□□□ 0.41
TSPAN4-203ENST00000397397 SNRPD3P62318 126 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-203ENST00000397397 PDE6HQ13956 83 aa17.61■□□□□ 0.41
TSPAN4-203ENST00000397397 LINC00052Q96N35 136 aa17.61■□□□□ 0.41
TSPAN4-203ENST00000397397 ZNF331Q9NQX6 463 aaPredicted RBP17.61■□□□□ 0.41
TSPAN4-203ENST00000397397 ZNF253O75346 499 aa17.6■□□□□ 0.41
TSPAN4-203ENST00000397397 NDUFB4O95168 129 aa17.6■□□□□ 0.41
TSPAN4-203ENST00000397397 BLOC1S1P78537 153 aa17.6■□□□□ 0.41
TSPAN4-203ENST00000397397 TEX46H3BTG2 121 aa17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 CMC4P56277 68 aaPredicted RBP17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 PSG9Q00887 426 aa17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 ODF3L2Q3SX64 289 aa17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 PSMG4Q5JS54 123 aa17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 RNF182Q8N6D2 247 aa17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 SUN5Q8TC36 379 aa17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 MAP6D1Q9H9H5 199 aa17.59■□□□□ 0.41
TSPAN4-203ENST00000397397 DNAH3Q8TD57 4116 aa17.58■□□□□ 0.41
TSPAN4-203ENST00000397397 HBE1P02100 147 aa17.58■□□□□ 0.41
TSPAN4-203ENST00000397397 HLA-DMBP28068 263 aa17.58■□□□□ 0.41
TSPAN4-203ENST00000397397 DEFB131AP59861 70 aa17.58■□□□□ 0.41
TSPAN4-203ENST00000397397 RANP62826 216 aaKnown RBP17.58■□□□□ 0.41
TSPAN4-203ENST00000397397 C20orf173Q96LM9 149 aa17.58■□□□□ 0.41
TSPAN4-203ENST00000397397 TRAV1-1A0A0B4J248 108 aa17.57■□□□□ 0.4
TSPAN4-203ENST00000397397 OR11H12B2RN74 326 aa17.57■□□□□ 0.4
TSPAN4-203ENST00000397397 MEGF8Q7Z7M0 2845 aa17.57■□□□□ 0.4
TSPAN4-203ENST00000397397 DEFA6Q01524 100 aa17.56■□□□□ 0.4
TSPAN4-203ENST00000397397 PSG3Q16557 428 aa17.56■□□□□ 0.4
TSPAN4-203ENST00000397397 EXOC3-AS1Q8N2X6 119 aa17.56■□□□□ 0.4
TSPAN4-203ENST00000397397 Q9H3A6 140 aa17.56■□□□□ 0.4
TSPAN4-203ENST00000397397 AAMDCQ9H7C9 122 aa17.56■□□□□ 0.4
TSPAN4-203ENST00000397397 CLEC5AQ9NY25 188 aa17.56■□□□□ 0.4
TSPAN4-203ENST00000397397 LYPD1Q8N2G4 141 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 FAM110AQ9BQ89 295 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 C19orf73Q9NVV2 129 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 UBE2G2P60604 165 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 CCL20P78556 96 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 IFITM2Q01629 132 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 ICAM4Q14773 271 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 APRG1Q8IVJ8 170 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 Q8N1Y9 231 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 ZNF738Q8NE65 137 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 WFDC10AQ9H1F0 79 aa17.55■□□□□ 0.4
TSPAN4-203ENST00000397397 PRB2P02812 416 aaPredicted RBP17.54■□□□□ 0.4
TSPAN4-203ENST00000397397 ZNF124Q15973 351 aa17.54■□□□□ 0.4
TSPAN4-203ENST00000397397 PCNPQ8WW12 178 aaKnown RBP17.54■□□□□ 0.4
TSPAN4-203ENST00000397397 OTORQ9NRC9 128 aa17.54■□□□□ 0.4
TSPAN4-203ENST00000397397 PRELID1Q9Y255 219 aa17.54■□□□□ 0.4
TSPAN4-203ENST00000397397 PGPA6NDG6 321 aa17.53■□□□□ 0.4
TSPAN4-203ENST00000397397 DEFB125Q8N687 156 aa17.53■□□□□ 0.4
TSPAN4-203ENST00000397397 AURKAIP1Q9NWT8 199 aaPredicted RBP17.53■□□□□ 0.4
TSPAN4-203ENST00000397397 ZNF705FA8MVS1 300 aaPredicted RBP17.52■□□□□ 0.4
TSPAN4-203ENST00000397397 PPT1P50897 306 aa17.52■□□□□ 0.4
TSPAN4-203ENST00000397397 DEFB1P60022 68 aa17.52■□□□□ 0.4
TSPAN4-203ENST00000397397 ZNF767PQ75MW2 155 aa17.52■□□□□ 0.4
TSPAN4-203ENST00000397397 YTHDF2Q9Y5A9 579 aaKnown RBP17.52■□□□□ 0.4
TSPAN4-203ENST00000397397 A0A1W2PRE2 83 aa17.51■□□□□ 0.39
TSPAN4-203ENST00000397397 M0R3E3 92 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms