RNA–Protein interactions for RNA: ENST00000397276.6

PABPN1-202, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PABPN1, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-202ENST00000397276 OR2D3Q8NGH3 330 aa18.72■□□□□ 0.59
PABPN1-202ENST00000397276 KLF12Q9Y4X4 402 aa18.72■□□□□ 0.59
PABPN1-202ENST00000397276 SPTAN1Q13813 2472 aaKnown RBP18.71■□□□□ 0.59
PABPN1-202ENST00000397276 GOLT1AQ6ZVE7 132 aa18.71■□□□□ 0.59
PABPN1-202ENST00000397276 FCGR2BP31994 310 aaPredicted RBP18.7■□□□□ 0.58
PABPN1-202ENST00000397276 RNF151Q2KHN1 245 aa18.7■□□□□ 0.58
PABPN1-202ENST00000397276 GNG7O60262 68 aa18.7■□□□□ 0.58
PABPN1-202ENST00000397276 HOXB4P17483 251 aaPredicted RBP18.7■□□□□ 0.58
PABPN1-202ENST00000397276 MPV17L2Q567V2 206 aa18.7■□□□□ 0.58
PABPN1-202ENST00000397276 ZNF491Q8N8L2 437 aa18.7■□□□□ 0.58
PABPN1-202ENST00000397276 MLST8Q9BVC4 326 aa18.7■□□□□ 0.58
PABPN1-202ENST00000397276 hDV102S1A0JD36 115 aa18.7■□□□□ 0.58
PABPN1-202ENST00000397276 PRNTQ86SH4 94 aa18.7■□□□□ 0.58
PABPN1-202ENST00000397276 CIARTQ8N365 385 aaPredicted RBP18.7■□□□□ 0.58
PABPN1-202ENST00000397276 WIPF2Q8TF74 440 aaPredicted RBP18.7■□□□□ 0.58
PABPN1-202ENST00000397276 SRSF8Q9BRL6 282 aaKnown RBP18.7■□□□□ 0.58
PABPN1-202ENST00000397276 ARPC1AQ92747 370 aa18.69■□□□□ 0.58
PABPN1-202ENST00000397276 RNF125Q96EQ8 232 aa18.69■□□□□ 0.58
PABPN1-202ENST00000397276 FMC1Q96HJ9 113 aa18.69■□□□□ 0.58
PABPN1-202ENST00000397276 FANCD2OSQ96PS1 177 aa18.69■□□□□ 0.58
PABPN1-202ENST00000397276 RNF24Q9Y225 148 aa18.69■□□□□ 0.58
PABPN1-202ENST00000397276 LTAP01374 205 aa18.68■□□□□ 0.58
PABPN1-202ENST00000397276 ANKRD39Q53RE8 183 aa18.68■□□□□ 0.58
PABPN1-202ENST00000397276 ZNF562Q6V9R5 426 aa18.68■□□□□ 0.58
PABPN1-202ENST00000397276 TMEM11P17152 192 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 FAM120AOSQ5T036 256 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 BPIFA4PQ86YQ2 179 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 OR4C5Q8NGB2 326 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 OR4C46A6NHA9 309 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 C19orf84I3L1E1 186 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 P01737 135 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 KLF5Q13887 457 aaPredicted RBP18.67■□□□□ 0.58
PABPN1-202ENST00000397276 VAMP3Q15836 100 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 CCDC144NLQ6NUI1 221 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 SHANK2-AS3Q9BTD1 123 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 OTORQ9NRC9 128 aa18.67■□□□□ 0.58
PABPN1-202ENST00000397276 DAZAP1Q96EP5 407 aaKnown RBP18.66■□□□□ 0.58
PABPN1-202ENST00000397276 CACNA1BQ00975 2339 aa18.66■□□□□ 0.58
PABPN1-202ENST00000397276 IGHV2-70DA0A0C4DH43 119 aa18.66■□□□□ 0.58
PABPN1-202ENST00000397276 OR2J3O76001 311 aa18.66■□□□□ 0.58
PABPN1-202ENST00000397276 CHRDL1Q9BU40 450 aa18.66■□□□□ 0.58
PABPN1-202ENST00000397276 RPP21Q9H633 154 aaKnown RBP18.66■□□□□ 0.58
PABPN1-202ENST00000397276 TMEM14CQ9P0S9 112 aa18.66■□□□□ 0.58
PABPN1-202ENST00000397276 TMEM70Q9BUB7 260 aa18.65■□□□□ 0.58
PABPN1-202ENST00000397276 GNLYP22749 145 aa18.65■□□□□ 0.58
PABPN1-202ENST00000397276 ZNF138P52744 262 aa18.65■□□□□ 0.58
PABPN1-202ENST00000397276 PGLYRP4Q96LB8 373 aa18.65■□□□□ 0.58
PABPN1-202ENST00000397276 BPESC1Q9GZL8 116 aa18.65■□□□□ 0.58
PABPN1-202ENST00000397276 IGLV11-55A0A075B6I3 123 aa18.64■□□□□ 0.58
PABPN1-202ENST00000397276 TRBV19A0A075B6N1 114 aa18.64■□□□□ 0.58
PABPN1-202ENST00000397276 IGHV3OR16-8A0A075B7F1 116 aa18.64■□□□□ 0.58
PABPN1-202ENST00000397276 IGHV3-35A0A0C4DH35 117 aa18.64■□□□□ 0.58
PABPN1-202ENST00000397276 H3BRN7 92 aa18.64■□□□□ 0.58
PABPN1-202ENST00000397276 K7EP13 123 aa18.64■□□□□ 0.58
PABPN1-202ENST00000397276 CELSR1Q9NYQ6 3014 aa18.64■□□□□ 0.57
PABPN1-202ENST00000397276 H0Y8G0 127 aa18.64■□□□□ 0.57
PABPN1-202ENST00000397276 GTSF1Q8WW33 167 aa18.64■□□□□ 0.57
PABPN1-202ENST00000397276 OR2T8A6NH00 312 aa18.64■□□□□ 0.57
PABPN1-202ENST00000397276 MFAP4P55083 255 aa18.64■□□□□ 0.57
PABPN1-202ENST00000397276 Q86TA4 180 aa18.64■□□□□ 0.57
PABPN1-202ENST00000397276 M0R3E3 92 aa18.63■□□□□ 0.57
PABPN1-202ENST00000397276 NUDT3O95989 172 aa18.63■□□□□ 0.57
PABPN1-202ENST00000397276 C1orf122Q6ZSJ8 110 aa18.63■□□□□ 0.57
PABPN1-202ENST00000397276 SIRPDQ9H106 197 aa18.63■□□□□ 0.57
PABPN1-202ENST00000397276 TIMM8BQ9Y5J9 83 aaPredicted RBP18.63■□□□□ 0.57
PABPN1-202ENST00000397276 IGLV2-11P01706 119 aa18.63■□□□□ 0.57
PABPN1-202ENST00000397276 COL8A1P27658 744 aa18.63■□□□□ 0.57
PABPN1-202ENST00000397276 RASL11AQ6T310 242 aa18.63■□□□□ 0.57
PABPN1-202ENST00000397276 ITLN2Q8WWU7 325 aaPredicted RBP18.63■□□□□ 0.57
PABPN1-202ENST00000397276 HLA-DRB1P01911 266 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 PMCHL2Q9BQD1 86 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 IGHV1-24A0A0C4DH33 117 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 A0A1B0GXF2 115 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 C19orf71A6NCJ1 209 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 F8W735 103 aaPredicted RBP18.62■□□□□ 0.57
PABPN1-202ENST00000397276 ZC2HC1AQ96GY0 325 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 PRSS22Q9GZN4 317 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 C21orf62Q9NYP8 219 aa18.62■□□□□ 0.57
PABPN1-202ENST00000397276 NPIPB5A8MRT5 1133 aa18.61■□□□□ 0.57
PABPN1-202ENST00000397276 CDKN1BP46527 198 aa18.61■□□□□ 0.57
PABPN1-202ENST00000397276 EFNA4P52798 201 aa18.61■□□□□ 0.57
PABPN1-202ENST00000397276 Q8N6K4 173 aa18.61■□□□□ 0.57
PABPN1-202ENST00000397276 SMIM12Q96EX1 92 aa18.61■□□□□ 0.57
PABPN1-202ENST00000397276 A8MWL6 223 aa18.61■□□□□ 0.57
PABPN1-202ENST00000397276 FOXE3Q13461 319 aa18.61■□□□□ 0.57
PABPN1-202ENST00000397276 CBY3A6NI87 242 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 TAX1BP3O14907 124 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 SIGLEC15Q6ZMC9 328 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 TTC9CQ8N5M4 171 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 IGHV7-81A0A0B4J1V7 117 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 MUC21A0A0G2JKD1 596 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 MUC21A0A140T8X8 626 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 WI2-2373I1.2A0A1W2PRP0 233 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 MUC21Q5SSG8 566 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 MINOS1Q5TGZ0 78 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 PRORYQ9H606 182 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 MINOS1-NBL1R4GNA1 71 aa18.6■□□□□ 0.57
PABPN1-202ENST00000397276 SYS1-DBNDD2H3BUS1 97 aa18.59■□□□□ 0.57
PABPN1-202ENST00000397276 EGR2P11161 476 aaPredicted RBP18.59■□□□□ 0.57
PABPN1-202ENST00000397276 ZNF414Q96IQ9 312 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms