RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 A0A087X0K7 114 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 IGLV5-52A0A0A0MRZ9 124 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 K7EP13 123 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 GATA2P23769 480 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-202ENST00000396629 Q6ZTI0 123 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 OR1S1Q8NH92 325 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 LINC00467Q9BRT7 94 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 MSRB1Q9NZV6 116 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 PLA2G2DQ9UNK4 145 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 GPR132Q9UNW8 380 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 ICOSQ9Y6W8 199 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 LRP1Q07954 4544 aaKnown RBP5.69□□□□□ -1.5
SCFD1-202ENST00000396629 ANKRD65E5RJM6 399 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 NPIPB6E9PJ23 425 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 HPGDSO60760 199 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 RAB3DO95716 219 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 C1QBP02746 253 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 RPL7P18124 248 aaKnown RBP5.69□□□□□ -1.5
SCFD1-202ENST00000396629 RAB11AP62491 216 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 SURF2Q15527 256 aaPredicted RBP5.69□□□□□ -1.5
SCFD1-202ENST00000396629 NEDD8Q15843 81 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 GFI1BQ5VTD9 330 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 LYPD5Q6UWN5 251 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 RPUSD4Q96CM3 377 aaKnown RBP5.69□□□□□ -1.5
SCFD1-202ENST00000396629 SHANK2-AS3Q9BTD1 123 aa5.69□□□□□ -1.5
SCFD1-202ENST00000396629 PRSS46E5RG02 174 aa5.68□□□□□ -1.5
SCFD1-202ENST00000396629 ZNF324O75467 553 aaPredicted RBP5.68□□□□□ -1.5
SCFD1-202ENST00000396629 TAS2R19P59542 299 aa5.68□□□□□ -1.5
SCFD1-202ENST00000396629 STEAP1BQ6NZ63 245 aa5.68□□□□□ -1.5
SCFD1-202ENST00000396629 LY96Q9Y6Y9 160 aa5.68□□□□□ -1.5
SCFD1-202ENST00000396629 A0A0B4J2A0 478 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 LRCOL1A6NCL2 159 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 PAX4O43316 350 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 OXTP01178 125 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 PRB4P10163 310 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-202ENST00000396629 LSM3P62310 102 aaKnown RBP5.67□□□□□ -1.5
SCFD1-202ENST00000396629 YIPF6Q96EC8 236 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 PRR13Q9NZ81 148 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 SHPKQ9UHJ6 478 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 TRGV2A0A075B6R0 118 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 LYZL2Q7Z4W2 148 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 PYGO2Q9BRQ0 406 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 PARD6GQ9BYG4 376 aaPredicted RBP5.67□□□□□ -1.5
SCFD1-202ENST00000396629 HIGD1AQ9Y241 93 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 KCNIP3Q9Y2W7 256 aa5.67□□□□□ -1.5
SCFD1-202ENST00000396629 MRPS12O15235 138 aaKnown RBP5.66□□□□□ -1.5
SCFD1-202ENST00000396629 PITX3O75364 302 aa5.66□□□□□ -1.5
SCFD1-202ENST00000396629 AKR1C4P17516 323 aa5.66□□□□□ -1.5
SCFD1-202ENST00000396629 CXCL2P19875 107 aa5.66□□□□□ -1.5
SCFD1-202ENST00000396629 PLP1P60201 277 aa5.66□□□□□ -1.5
SCFD1-202ENST00000396629 C11orf72Q8NBR9 251 aa5.66□□□□□ -1.5
SCFD1-202ENST00000396629 LRRC20Q8TCA0 184 aa5.66□□□□□ -1.5
SCFD1-202ENST00000396629 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
SCFD1-202ENST00000396629 FAM25AB3EWG3 89 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 FAM25CB3EWG5 89 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 FAM25GB3EWG6 89 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 IAPPP10997 89 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 EVI2AP22794 236 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 RAP2BP61225 183 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 MRPL23Q16540 153 aaKnown RBP5.65□□□□□ -1.5
SCFD1-202ENST00000396629 FAAP20Q6NZ36 180 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 Q6ZSA8 131 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 CYP2G1PQ6ZSU1 146 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 ACOT7LQ6ZUV0 252 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 ODF3Q96PU9 254 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 ZNF331Q9NQX6 463 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-202ENST00000396629 PRO0255Q9UI72 69 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 FUT9Q9Y231 359 aa5.65□□□□□ -1.5
SCFD1-202ENST00000396629 TRAV12-3A0A0B4J271 114 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 DISC1C4P0D8 188 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 SPINK4O60575 86 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 HYPMO75409 117 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 CRYBA4P53673 196 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 SSBP1Q04837 148 aaKnown RBP5.65□□□□□ -1.51
SCFD1-202ENST00000396629 SLAQ13239 276 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 C4orf46Q504U0 113 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 NEGR1Q7Z3B1 354 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 CCDC190Q86UF4 302 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 WFDC10BQ8IUB3 73 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 Q8N814 137 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 ZNF680Q8NEM1 530 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 ZNF431Q8TF32 576 aaPredicted RBP5.65□□□□□ -1.51
SCFD1-202ENST00000396629 GSN-AS1Q9NRJ2 163 aa5.65□□□□□ -1.51
SCFD1-202ENST00000396629 PAIP2BQ9ULR5 123 aaKnown RBP5.65□□□□□ -1.51
SCFD1-202ENST00000396629 TRGV1A0A0A0MS02 117 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 PRAC2D3DTV9 90 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 CT45A10P0DMU9 189 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 LEPP41159 167 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 KRTAP10-4P60372 401 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-202ENST00000396629 RPP30P78346 268 aaKnown RBP5.64□□□□□ -1.51
SCFD1-202ENST00000396629 MZT2AQ6P582 158 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 LCN15Q6UWW0 184 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 ZBTB8BQ8NAP8 495 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-202ENST00000396629 C15orf40Q8WUR7 153 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 ST6GAL2Q96JF0 529 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 SLC50A1Q9BRV3 221 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 Q9H521 79 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 EXTL2Q9UBQ6 330 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 PMS2P5A8MQ11 134 aa5.64□□□□□ -1.51
SCFD1-202ENST00000396629 MED6O75586 246 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms