RNA–Protein interactions for RNA: ENST00000396595.7

LIMCH1-203, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-203ENST00000396595 LYNX1P0DP58 116 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 ZNF138P52744 262 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 CRYBA4P53673 196 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 SPSB3Q6PJ21 355 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 RNF144BQ7Z419 303 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 IL18BPO95998 194 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 MST1LQ2TV78 715 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 TMEM200BQ69YZ2 307 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 FOXL2NBQ6ZUU3 175 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 C9orf139Q6ZV77 190 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 IGHV1-3A0A0C4DH29 117 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 E9PLN8 166 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 U3KQE9 123 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 LINC00473A8K010 186 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 F8WEM9 126 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 PAX4O43316 350 aa8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 PRB4P10163 310 aaPredicted RBP8.38□□□□□ -1.07
LIMCH1-203ENST00000396595 H0YJW9 148 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 VDAC2P45880 294 aaPredicted RBP8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 C15orf32Q32M92 178 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 POLEQ07864 2286 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 A0A0G2JRQ6 117 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 CEACAM8P31997 349 aaPredicted RBP8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 SH2D1AO60880 128 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 MINOS1Q5TGZ0 78 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 DPH3P1Q9H4G8 78 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 MINOS1-NBL1R4GNA1 71 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 RPL15P61313 204 aaKnown RBP8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 Q0VG73 95 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 METRNQ9UJH8 293 aa8.37□□□□□ -1.07
LIMCH1-203ENST00000396595 TMEM178BH3BS89 294 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 ZNF672Q499Z4 452 aaPredicted RBP8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 TRGV4A0A0C4DH28 118 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 CSRP1P21291 193 aaKnown RBP8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 Q6ZRM9 215 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 ANAPC10Q9UM13 185 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 ADARB2-AS1A8MUL3 147 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 VCYO14598 125 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 RNASE2P10153 161 aaKnown RBP8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 SRD5A1P18405 259 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 HAMPP81172 84 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 ROS1P08922 2347 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 BMPERQ8N8U9 685 aa8.36□□□□□ -1.07
LIMCH1-203ENST00000396595 IGHG4P01861 327 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 HTN3P15516 51 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 LINC00477Q96M19 166 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 GFRA4Q9GZZ7 299 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 C5orf64Q2M2E5 130 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 C5orf24Q7Z6I8 188 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 C9JQL5 133 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 PFN1P07737 140 aaKnown RBP8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 IGLC2P0DOY2 106 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 IGLC3P0DOY3 106 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 WNK2Q9Y3S1 2297 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 KIAA2026Q5HYC2 2103 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 SPTBN2O15020 2390 aa8.35□□□□□ -1.07
LIMCH1-203ENST00000396595 CHCHD5Q9BSY4 110 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 SIGLEC9Q9Y336 463 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 NEGR1Q7Z3B1 354 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 Q86TA4 180 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 ZNF329Q86UD4 541 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 TMEM158Q8WZ71 300 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 SRRM4A7MD48 611 aaKnown RBP8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 FHL1Q13642 323 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 RASL10AQ92737 203 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 GAFA1Q96PS6 74 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 ZNF581Q9P0T4 197 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 TRAV40A0A0B4J280 105 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 A0A1W2PRX2 142 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 LILRA1O75019 489 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 HOXD3P31249 432 aaPredicted RBP8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 VMO1Q7Z5L0 202 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 TRBV7-1A0A0A6YYK4 115 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 CMC4P56277 68 aaPredicted RBP8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 PKIGQ9Y2B9 76 aa8.34□□□□□ -1.07
LIMCH1-203ENST00000396595 B3GALT5-AS1P59052 145 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 TEX43Q6ZNM6 134 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 TMEM105Q8N8V8 129 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 Q8TAT8 98 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 WNK3Q9BYP7 1800 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 IGKV1D-17A0A075B6S4 117 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 PDE6HQ13956 83 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 ZNF492Q9P255 531 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 MYMXA0A1B0GTQ4 84 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 INS-IGF2F8WCM5 200 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 M0R1W7 72 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 ATOX1O00244 68 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 INSP01308 110 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 BVES-AS1Q5T3Y7 98 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 RCHY1Q96PM5 261 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 LINC00527Q9UJ94 153 aa8.33□□□□□ -1.08
LIMCH1-203ENST00000396595 A0A1W2PPI3 338 aa8.32□□□□□ -1.08
LIMCH1-203ENST00000396595 H3BMG7 143 aa8.32□□□□□ -1.08
LIMCH1-203ENST00000396595 PRR31Q5SQ13 230 aa8.32□□□□□ -1.08
LIMCH1-203ENST00000396595 CLPSL1A2RUU4 121 aa8.32□□□□□ -1.08
LIMCH1-203ENST00000396595 FXYD7P58549 80 aa8.32□□□□□ -1.08
LIMCH1-203ENST00000396595 RPL36AP83881 106 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 356.9 ms