RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 TCRAP04437 139 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 DEFB1P60022 68 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 PYY3Q5JQD4 70 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 METTL26Q96S19 204 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 UFC1Q9Y3C8 167 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 A0A087X0M5 115 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 A0A1B0GX30 115 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 SERF1AO75920 110 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 RPL7P18124 248 aaKnown RBP12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 DEFA6Q01524 100 aa12.52□□□□□ -0.41
SMARCD1-202ENST00000394963 A0A1W2PRX2 142 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 F2Z2F3 143 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 RAB4AP20338 218 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 MINOS1Q5TGZ0 78 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 ATG101Q9BSB4 218 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 MINOS1-NBL1R4GNA1 71 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 ITPR2Q14571 2701 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 S100A4P26447 101 aaKnown RBP12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 ARL3P36405 182 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 ZNF138P52744 262 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 ERCC8Q13216 396 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 HIST1H2BLQ99880 126 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 DMRT1Q9Y5R6 373 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 IGHV1-69DA0A0B4J2H0 117 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 A8MWL6 223 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 SPRY2O43597 315 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 GCGP01275 180 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 IGHV1-69P01742 117 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 ZNF491Q8N8L2 437 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 ZNF738Q8NE65 137 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 EEF1AKMT3Q96AZ1 226 aa12.51□□□□□ -0.41
SMARCD1-202ENST00000394963 I3L2K1 104 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 Q8N9W7 124 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 TMEM75Q8N9X5 138 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 TEX15Q9BXT5 2789 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 GCN1Q92616 2671 aaKnown RBP12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 UBE2CO00762 179 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 C21orf62-AS1Q17RA5 79 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 Q71RC1 249 aaPredicted RBP12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 TRAV30A0A087WSZ9 112 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 B4DSR2 109 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 FXYD7P58549 80 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 HIST3H2BBQ8N257 126 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 ARL2-SNX15V9GYD0 113 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 CSMD2Q7Z408 3487 aa12.5□□□□□ -0.41
SMARCD1-202ENST00000394963 IGHV4-59P01825 116 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 FOLR2P14207 255 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 PSG8Q9UQ74 426 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 KRTAP10-9P60411 292 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 LY6G5BQ8NDX9 201 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 CFHR4Q92496 578 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 LINC00587B1AMM8 73 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 OR4B1Q8NGF8 309 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 C8orf49Q96NF6 230 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 SIRPDQ9H106 197 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 TMEM242Q9NWH2 141 aa12.49□□□□□ -0.41
SMARCD1-202ENST00000394963 SMIM6P0DI80 62 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 CDC42EP3Q9UKI2 254 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 AMBPP02760 352 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 TWIST1Q15672 202 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 AARDQ4LEZ3 155 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 DMRTA1Q5VZB9 504 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 TMEM183AQ8IXX5 376 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 FANCD2OSQ96PS1 177 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 MCRIP2Q9BUT9 160 aaKnown RBP12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 MOB4Q9Y3A3 225 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 KLK15Q9H2R5 256 aa12.48□□□□□ -0.41
SMARCD1-202ENST00000394963 TMEM189A5PLL7 270 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 M0R2Z0 102 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 PRSS3P2Q8NHM4 247 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 RNF5Q99942 180 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 PVRIGQ6DKI7 326 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 C8orf31Q8N9H6 132 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 NUP35Q8NFH5 326 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 Q96MF0 132 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 DUX3Q96PT4 197 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 PMCHL2Q9BQD1 86 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 HIST1H1AQ02539 215 aaPredicted RBP12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 Q6ZS46 218 aa12.47□□□□□ -0.41
SMARCD1-202ENST00000394963 NUPR1O60356 82 aa12.46□□□□□ -0.41
SMARCD1-202ENST00000394963 GSN-AS1Q9NRJ2 163 aa12.46□□□□□ -0.41
SMARCD1-202ENST00000394963 V9GYV3 84 aa12.46□□□□□ -0.41
SMARCD1-202ENST00000394963 TRBV12-3P01733 135 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 TAS2R60P59551 318 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 Q5PR19 223 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 C10orf105Q8TEF2 133 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 RPP21Q9H633 154 aaKnown RBP12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 FNDC10F2Z333 226 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 OVOL3O00110 214 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 PAX8Q06710 450 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 WDR73Q6P4I2 378 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 THAP8Q8NA92 274 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 SHANK2-AS3Q9BTD1 123 aa12.46□□□□□ -0.42
SMARCD1-202ENST00000394963 TMEM78Q5T7P6 136 aa12.45□□□□□ -0.42
SMARCD1-202ENST00000394963 OTORQ9NRC9 128 aa12.45□□□□□ -0.42
SMARCD1-202ENST00000394963 LY6LH3BQJ8 138 aa12.45□□□□□ -0.42
SMARCD1-202ENST00000394963 DEFB112Q30KQ8 113 aa12.45□□□□□ -0.42
SMARCD1-202ENST00000394963 OSTCQ9NRP0 149 aa12.44□□□□□ -0.42
SMARCD1-202ENST00000394963 TBL2Q9Y4P3 447 aaKnown RBP12.44□□□□□ -0.42
SMARCD1-202ENST00000394963 C9JCJ5 164 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms