RNA–Protein interactions for RNA: ENST00000390468.1

TRAV41-201, Transcript of T cell receptor alpha variable 41, humanhuman

APPRIS P1 BASIC

Gene TRAV41, Length 336 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41-201ENST00000390468 IGKV3D-15A0A087WSY6 115 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 A0A1B0GTH9 108 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 LOC107986453A0A1B0GWG9 222 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 MBD3L5A6NJ08 208 aaPredicted RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 TMEM14DPA8MWL7 114 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 IGLL5B9A064 214 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 H3BSH0 61 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 K7EN84 100 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 K7ENP7 123 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 SPRY1O43609 319 aaPredicted RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 LMX1BO60663 402 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 PDCD6O75340 191 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 NDUFB4O95168 129 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 NDUFC2O95298 119 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 NCR2O95944 276 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 IGHV3-9P01782 118 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 CECR9P0C854 216 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 NHLRC4P0CG21 123 aaPredicted RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 HLA-DRB4P13762 266 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 B4GALT1P15291 398 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 CNTFRP26992 372 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 CDAP32320 146 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 RPL13AP40429 203 aaKnown RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 OPRK1P41145 380 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 TMEM50BP56557 158 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 LOXL3P58215 753 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 PCBD1P61457 104 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 HERVK_113P63121 156 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 SLC38A11Q08AI6 406 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 GUSBP1Q15486 140 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 ZNF726P1Q15940 193 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 RRN3P1Q2M238 152 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 C1orf195Q5TG92 126 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 LINC01545Q5VT33 79 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 CFAP126Q5VTH2 177 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 GAGE2AQ6NT46 116 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 PQLC2Q6ZP29 291 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 FOXL2NBQ6ZUU3 175 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 GOLT1AQ6ZVE7 132 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 LYZL2Q7Z4W2 148 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 DTX2Q86UW9 622 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 C3orf22Q8N5N4 141 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 CNEP1R1Q8N9A8 125 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 TEX45Q8NA69 505 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 TMEM116Q8NCL8 245 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 GJC3Q8NFK1 279 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 OR11H6Q8NGC7 330 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 COPS9Q8WXC6 57 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 DDB2Q92466 427 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 TAF15Q92804 592 aaKnown RBP eCLIP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 SPTSSAQ969W0 71 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 NABP1Q96AH0 204 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 ZC2HC1AQ96GY0 325 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 LINC00479Q96M42 142 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 BBC3Q96PG8 261 aaPredicted RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 KIR2DL4Q99706 377 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 VKORC1Q9BQB6 163 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 CHAC1Q9BUX1 264 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 SLC25A2Q9BXI2 301 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 TMEM222Q9H0R3 208 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 SIRPDQ9H106 197 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 OSTCQ9NRP0 149 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 TNFRSF19Q9NS68 423 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 NHP2Q9NX24 153 aaKnown RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 IDI2-AS1Q9NZ38 188 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 PSENENQ9NZ42 101 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 SPRR3Q9UBC9 169 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 IL36RNQ9UBH0 155 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 PRNDQ9UKY0 176 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 FZR1Q9UM11 496 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 ZNF256Q9Y2P7 627 aaPredicted RBP2.12□□□□□ -2.07
TRAV41-201ENST00000390468 LHFPL6Q9Y693 200 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 R4GMQ9 66 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 HLA-DRB4X5D2U9 266 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 AKAP13Q12802 2813 aa2.12□□□□□ -2.07
TRAV41-201ENST00000390468 ANKRD11Q6UB99 2663 aaPredicted RBP2.11□□□□□ -2.07
TRAV41-201ENST00000390468 CACNA1BQ00975 2339 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 TRAV2A0A0B4J234 112 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 SMIM27A0A1W2PRY6 76 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 FAM90A18PA6NE21 464 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 FAM90A16PA6NEW6 464 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 FAM90A8PA6NJQ4 464 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 FAM90A9PA6NNJ1 464 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 KRTAP29-1A8MX34 341 aaPredicted RBP2.11□□□□□ -2.07
TRAV41-201ENST00000390468 PRR32B1ATL7 298 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 SHISA9B4DS77 424 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 M0R135 149 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 M0R2P5 195 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 HSPB6O14558 160 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 RRHO14718 337 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 CHEK1O14757 476 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 ZNHIT1O43257 154 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 SYNGR2O43760 224 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 SS18L1O75177 396 aaPredicted RBP2.11□□□□□ -2.07
TRAV41-201ENST00000390468 MPDU1O75352 247 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 TRACP01848 142 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 RBP4P02753 201 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 IGLC6P0CF74 106 aa2.11□□□□□ -2.07
TRAV41-201ENST00000390468 ZNF32P17041 273 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms