RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 CLIP1P30622 1438 aa1.14□□□□□ -2.23
TRAV40-201ENST00000390467 TNRC6AQ8NDV7 1962 aaKnown RBP1.14□□□□□ -2.23
TRAV40-201ENST00000390467 UBR2Q8IWV8 1755 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 FRMPD1Q5SYB0 1578 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 CAMSAP2Q08AD1 1489 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 TEX14Q8IWB6 1497 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 BCORL1Q5H9F3 1711 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 ANKRD26Q9UPS8 1709 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 TRGV10A0A0A0MS01 117 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV1OR15-9A0A0B4J2B8 117 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 IGKV1-9A0A0C4DH69 117 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 A0A0J9YW62 118 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 A0A1B0GW54 56 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 LOC107986453A0A1B0GWG9 222 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 TMEM262E9PQX1 116 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 M0R129 80 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 UQCRQO14949 82 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 RER1O15258 196 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 SYNGR2O43760 224 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 NDUFB2O95178 105 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 SOD1P00441 154 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV3-11P01762 117 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 C1QAP02745 245 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 OR5AC1P0C628 307 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 CRYGAP11844 174 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 RNASE4P34096 147 aaKnown RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 SRP14P37108 136 aaKnown RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 NUDT2P50583 147 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 ARPP19P56211 112 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 RPL30P62888 115 aaKnown RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 ATP5G2Q06055 141 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 BSPH1Q075Z2 132 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 FOXF1Q12946 379 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 LINC01554Q52M75 96 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 MPV17L2Q567V2 206 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 Q56UQ5 140 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 LINC01545Q5VT33 79 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 MRPL54Q6P161 138 aaKnown RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 GUSBP11Q6P575 273 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 MORN3Q6PF18 240 aaPredicted RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF705AQ6ZN79 300 aaPredicted RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 Q6ZUT4 128 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 ZNF720Q7Z2F6 126 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 Q8N2B8 174 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 C10orf111Q8N326 155 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 KCNRGQ8N5I3 272 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 TMEM105Q8N8V8 129 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 DAND5Q8N907 189 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 WFDC11Q8NEX6 87 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 OR10P1Q8NGE3 313 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 OR4B1Q8NGF8 309 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 OR4X2Q8NGF9 303 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 OR8A1Q8NGG7 326 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 OR4A5Q8NH83 315 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 OTOSQ8NHW6 89 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 WFDC5Q8TCV5 224 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 C2orf15Q8WU43 125 aaKnown RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 GINS4Q9BRT9 223 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 VAMP8Q9BV40 100 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 SEC11CQ9BY50 192 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 FGF23Q9GZV9 251 aaPredicted RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 ATG5Q9H1Y0 275 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 NAA60Q9H7X0 242 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 FAM60AQ9NP50 221 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 BET1LQ9NYM9 111 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 IL36BQ9NZH7 164 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 RPL26L1Q9UNX3 145 aaKnown RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 LINC00588Q9Y4M8 146 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 DNAJC15Q9Y5T4 150 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 LINC00312Q9Y6C7 94 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 CHCHD2Q9Y6H1 151 aaPredicted RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 SCN8AQ9UQD0 1980 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 MAPKBP1O60336 1514 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 HEATR5AQ86XA9 2040 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 KDM5CP41229 1560 aa1.13□□□□□ -2.23
TRAV40-201ENST00000390467 THOC2Q8NI27 1593 aaKnown RBP1.13□□□□□ -2.23
TRAV40-201ENST00000390467 ECM29Q5VYK3 1845 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 KIF13AQ9H1H9 1805 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 MYO18AQ92614 2054 aaKnown RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 FANCAO15360 1455 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 AHDC1Q5TGY3 1603 aaPredicted RBP1.12□□□□□ -2.23
TRAV40-201ENST00000390467 NUP210LQ5VU65 1888 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 ANKRD31Q8N7Z5 1873 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 TOPBP1Q92547 1522 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 TRBV20-1A0A075B6N2 111 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 TRGV5A0A0B4J1U4 118 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 IGHV3-43A0A0B4J1X8 118 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 A0A0D9SG52 128 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 MUC21A0A0G2JKD1 596 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 C3orf85A0A1B0GTC6 90 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 OOSP1A8MZH6 123 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 G3V3Q6 166 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 H3BQ15 152 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 H3BT86 120 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 C19orf84I3L1E1 186 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 K7ERJ3 54 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 M0R2P5 195 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 HRASP01112 189 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 MT-ND6P03923 174 aa1.12□□□□□ -2.23
TRAV40-201ENST00000390467 MT-ATP8P03928 68 aa1.12□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms