RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 LBHQ53QV2 105 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 SLC48A1Q6P1K1 146 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 ERICH5Q6P6B1 374 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 DHRS4L2Q6PKH6 230 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 WDR82Q6UXN9 313 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 NPSR1Q6W5P4 371 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 GOLGA7Q7Z5G4 137 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 DHFR2Q86XF0 187 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 SERPINA12Q8IW75 414 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CMTM8Q8IZV2 173 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 VKORC1L1Q8N0U8 176 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 C4orf33Q8N1A6 199 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 SIGLECL1Q8N7X8 197 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 STMN2Q93045 179 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM230Q96A57 120 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 PINX1Q96BK5 328 aaKnown RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CIB3Q96Q77 187 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CLCC1Q96S66 551 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 LINC01587Q99440 93 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 RARRES2Q99969 163 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAAP24Q9BTP7 215 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 ACPTQ9BZG2 426 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 IQCGQ9H095 443 aaKnown RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 RBKSQ9H477 322 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 WDR55Q9H6Y2 383 aaPredicted RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 MRM3Q9HC36 420 aaKnown RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 MID1IP1Q9NPA3 183 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CLN6Q9NWW5 311 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 TAS2R5Q9NYW4 299 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 HMG20BQ9P0W2 317 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CPSF2Q9P2I0 782 aaKnown RBP-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 CLN8Q9UBY8 286 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 MAD2L2Q9UI95 211 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 TEKT2Q9UIF3 430 aa-2.13□□□□□ -2.75
RNU6-540P-201ENST00000384622 A2MP01023 1474 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 FHAD1B1AJZ9 1412 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKARQ7Z5J8 1434 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TRBV24-1A0A075B6N3 115 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 K7ERQ8 282 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 M0QYV0 167 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 HMGB3O15347 200 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 PRKAB2O43741 272 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 MFSD11O43934 449 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 PROSCO94903 275 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 S100A8P05109 93 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 FABP3P05413 133 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 SERPINE2P07093 398 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 UCHL1P09936 223 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 SMIM6P0DI80 62 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 APELAP0DMC3 54 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR13C7P0DN81 318 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 PYYP10082 97 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 FGF6P10767 208 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 MLNP12872 115 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAB3BP20337 219 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 IL10P22301 178 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 PBLDP30039 288 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 CA8P35219 290 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 PPP1CCP36873 323 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 HSPA9P38646 679 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 CSKP41240 450 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 SSR1P43307 286 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 OMPP47874 163 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TNFSF10P50591 281 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 CMC4P56277 68 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TAS2R43P59537 309 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RPL30P62888 115 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 C2orf80Q0P641 193 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 DDX39BQ13838 428 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMEM95Q3KNT9 176 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RWDD4Q6NW29 188 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 FAM180BQ6P0A1 224 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 SLC25A26Q70HW3 274 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 EIF3MQ7L2H7 374 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 LUZP2Q86TE4 346 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RANBP3LQ86VV4 465 aaPredicted RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKRD46Q86W74 232 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 MREGQ8N565 214 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 ARL10Q8N8L6 244 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR13C4Q8NGS5 318 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 OR6N1Q8NGY5 312 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 CLHC1Q8NHS4 586 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 DCAKDQ8WVC6 231 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 KCTD4Q8WVF5 259 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 POP5Q969H6 163 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 HIST1H2BAQ96A08 127 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RCN3Q96D15 328 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 FXYD5Q96DB9 178 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RRP36Q96EU6 259 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TMA16Q96EY4 203 aaKnown RBP-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 ADTRPQ96IZ2 230 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 BTF3L4Q96K17 158 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 MIEN1Q9BRT3 115 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RTL8AQ9BWD3 113 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 ANKRD19PQ9H560 264 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 PARVBQ9HBI1 364 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TUFT1Q9NNX1 390 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TAS2R3Q9NYW6 316 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 RAB22AQ9UL26 194 aa-2.14□□□□□ -2.75
RNU6-540P-201ENST00000384622 TIMM9Q9Y5J7 89 aa-2.14□□□□□ -2.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms