RNA–Protein interactions for RNA: ENST00000383861.1

RNU1-28P-201, Transcript of RNA, U1 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU1-28P, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-28P-201ENST00000383861 PAFAH1B2P68402 229 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 DEFB136Q30KP8 78 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 AWAT1Q58HT5 328 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 C10orf91Q5T1B1 145 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 MRPL53Q96EL3 112 aaKnown RBP6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 SIGLEC8Q9NYZ4 499 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 EPDR1Q9UM22 224 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 CARHSP1Q9Y2V2 147 aaKnown RBP6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 SMAD5-AS1Q9Y6J3 95 aa6.74□□□□□ -1.33
RNU1-28P-201ENST00000383861 ZNF469Q96JG9 3925 aaPredicted RBP6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 IGHV3-49A0A0A0MS15 119 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 IGHV3-66A0A0C4DH42 116 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 FBLL1A6NHQ2 334 aaKnown RBP6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 ZNF727A8MUV8 499 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 GGTLC3B5MD39 225 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 C9JQL5 133 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 OVOL1O14753 267 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 NDUFB4O95168 129 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 FOLR2P14207 255 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 ID1P41134 155 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 CNN1P51911 297 aaKnown RBP6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 CEBPGP53567 150 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 RPL11P62913 178 aaKnown RBP6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 SRSF2Q01130 221 aaKnown RBP6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 NSUN5P1Q3KNT7 163 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 TCF24Q7RTU0 167 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 SVBPQ8N300 66 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 CYB561D1Q8N8Q1 229 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 TMEM158Q8WZ71 300 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 DLX4Q92988 240 aaPredicted RBP6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 NIPSNAP3BQ9BS92 247 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 ATG101Q9BSB4 218 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 NRN1Q9NPD7 142 aa6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 ZNF331Q9NQX6 463 aaPredicted RBP6.73□□□□□ -1.33
RNU1-28P-201ENST00000383861 SONP18583 2426 aaKnown RBP6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 IGHV3OR16-13A0A075B7E8 117 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 IGHV3-74A0A0B4J1X5 117 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 SCO2A0A1W2PP80 73 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 ADARB2-AS1A8MUL3 147 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 PEX7O00628 323 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 AKR1C3P42330 323 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 TAS2R60P59551 318 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 PNRC1Q12796 327 aaPredicted RBP6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 TMEM241Q24JQ0 296 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 FAM90A2PQ658T7 463 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 DYNLRB2Q8TF09 96 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 C16orf92Q96LL3 132 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 C17orf77Q96MU5 243 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 LINC00052Q96N35 136 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 CITED1Q99966 193 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 SMIM7Q9BQ49 75 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 PARLQ9H300 379 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 MLXQ9UH92 298 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 LY96Q9Y6Y9 160 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 TLN2Q9Y4G6 2542 aa6.72□□□□□ -1.33
RNU1-28P-201ENST00000383861 CELSR1Q9NYQ6 3014 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 TRAV2A0A0B4J234 112 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 TRAV25A0A0B4J276 109 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 H3BTX0 84 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 ISLRO14498 428 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 SNAPINO95295 136 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 APOC3P02656 99 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 PF4P02776 101 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 TCRAP04437 139 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 CSN3P07498 182 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 KRTAP10-3P60369 221 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 EXOC3-AS1Q8N2X6 119 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 OR2K2Q8NGT1 345 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 C2CD4CQ8TF44 421 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 SMIM12Q96EX1 92 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 FMC1Q96HJ9 113 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 DUX3Q96PT4 197 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 NAT8Q9UHE5 227 aa6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 FLNBO75369 2602 aaKnown RBP6.71□□□□□ -1.34
RNU1-28P-201ENST00000383861 HIVEP1P15822 2718 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 TRBV6-1A0A0K0K1D8 114 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 RBAKDNA6NC62 111 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 B4DEV8 164 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 C9JCJ5 164 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 DNASE2O00115 360 aaPredicted RBP6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 SLC17A3O00476 420 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 SNRPCP09234 159 aaKnown RBP6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 RPL35P42766 123 aaKnown RBP6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 UBE2G1P62253 170 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 SNRPD3P62318 126 aaKnown RBP6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 PSG3Q16557 428 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 TMEM183BQ1AE95 376 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 ZNF674Q2M3X9 581 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 KRTAP24-1Q3LI83 254 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 RBPMS2Q6ZRY4 209 aaKnown RBP6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 TMEM75Q8N9X5 138 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 TVP23CQ96ET8 276 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 ZNF747Q9BV97 191 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 BIN3Q9NQY0 253 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 KLF12Q9Y4X4 402 aa6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 FN1P02751 2386 aaKnown RBP6.7□□□□□ -1.34
RNU1-28P-201ENST00000383861 SVEP1Q4LDE5 3571 aa6.69□□□□□ -1.34
RNU1-28P-201ENST00000383861 DIRC3C9JPN6 131 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms