RNA–Protein interactions for RNA: ENST00000382515.6

CD9-202, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-202ENST00000382515 ZFP69Q49AA0 526 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 KHDC3LQ587J8 217 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 EIF5AL1Q6IS14 154 aaKnown RBP13.09□□□□□ -0.31
CD9-202ENST00000382515 PQLC2Q6ZP29 291 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 APRG1Q8IVJ8 170 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 STHQ8IWL8 128 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 FAM167A-AS1Q96KT0 104 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
CD9-202ENST00000382515 PSG9Q00887 426 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 TMEM41BQ5BJD5 291 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 MIR17HGQ75NE6 70 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 BAP18Q8IXM2 172 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 SAT2Q96F10 170 aaPredicted RBP13.08□□□□□ -0.32
CD9-202ENST00000382515 CLUHP3Q96NS8 147 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 CITED4Q96RK1 184 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 PAXXQ9BUH6 204 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 ZNF471Q9BX82 626 aaPredicted RBP13.08□□□□□ -0.32
CD9-202ENST00000382515 SLC25A2Q9BXI2 301 aa13.08□□□□□ -0.32
CD9-202ENST00000382515 ACTR3CQ9C0K3 210 aaPredicted RBP13.08□□□□□ -0.32
CD9-202ENST00000382515 ZNF331Q9NQX6 463 aaPredicted RBP13.08□□□□□ -0.32
CD9-202ENST00000382515 TRBV19A0A075B6N1 114 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 RBMY1BA6NDE4 496 aaKnown RBP13.07□□□□□ -0.32
CD9-202ENST00000382515 RBMY1EA6NEQ0 496 aaKnown RBP13.07□□□□□ -0.32
CD9-202ENST00000382515 UMAD1C9J7I0 102 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 NBEAP1P0C6P0 100 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 RBMY1DP0C7P1 496 aaKnown RBP13.07□□□□□ -0.32
CD9-202ENST00000382515 TPT1P13693 172 aaKnown RBP13.07□□□□□ -0.32
CD9-202ENST00000382515 AKR1C8PQ5T2L2 129 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 EBLN2Q6P2I7 272 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 FOXI2Q6ZQN5 318 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 LYPD1Q8N2G4 141 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 RPP25LQ8N5L8 163 aaKnown RBP13.07□□□□□ -0.32
CD9-202ENST00000382515 STOML3Q8TAV4 291 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 RNF141Q8WVD5 230 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 WFDC10AQ9H1F0 79 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 PRELID1Q9Y255 219 aa13.07□□□□□ -0.32
CD9-202ENST00000382515 H3BQ15 152 aa13.06□□□□□ -0.32
CD9-202ENST00000382515 NUTF2P61970 127 aaKnown RBP13.06□□□□□ -0.32
CD9-202ENST00000382515 PSG3Q16557 428 aa13.06□□□□□ -0.32
CD9-202ENST00000382515 HAGHQ16775 308 aa13.06□□□□□ -0.32
CD9-202ENST00000382515 MORN3Q6PF18 240 aaPredicted RBP13.06□□□□□ -0.32
CD9-202ENST00000382515 CSTL1Q9H114 145 aa13.06□□□□□ -0.32
CD9-202ENST00000382515 SH3BGRL3Q9H299 93 aa13.06□□□□□ -0.32
CD9-202ENST00000382515 ZNF586Q9NXT0 402 aa13.06□□□□□ -0.32
CD9-202ENST00000382515 TRAV8-2A0A0B4J237 113 aa13.05□□□□□ -0.32
CD9-202ENST00000382515 OR7C2O60412 319 aa13.05□□□□□ -0.32
CD9-202ENST00000382515 CDC34P49427 236 aaPredicted RBP13.05□□□□□ -0.32
CD9-202ENST00000382515 RAB2AP61019 212 aa13.05□□□□□ -0.32
CD9-202ENST00000382515 SLC51BQ86UW2 128 aa13.05□□□□□ -0.32
CD9-202ENST00000382515 SBSPONQ8IVN8 264 aa13.05□□□□□ -0.32
CD9-202ENST00000382515 MRPL53Q96EL3 112 aaKnown RBP13.05□□□□□ -0.32
CD9-202ENST00000382515 SAV1Q9H4B6 383 aaPredicted RBP13.05□□□□□ -0.32
CD9-202ENST00000382515 ZMAT4Q9H898 229 aa13.05□□□□□ -0.32
CD9-202ENST00000382515 RFNGQ9Y644 331 aa13.05□□□□□ -0.32
CD9-202ENST00000382515 PRKDCP78527 4128 aaKnown RBP13.04□□□□□ -0.32
CD9-202ENST00000382515 H3BMM0 161 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 DUSP14O95147 198 aaKnown RBP13.04□□□□□ -0.32
CD9-202ENST00000382515 STAG3L2P0CL84 134 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 STAG3L3P0CL85 134 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 HLA-DRB4P13762 266 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 ACTL10Q5JWF8 245 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 FAM122CQ6P4D5 195 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 Q6ZWC4 215 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 RAB24Q969Q5 203 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 FXYD5Q96DB9 178 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 AAMDCQ9H7C9 122 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 HLA-DRB4X5D2U9 266 aa13.04□□□□□ -0.32
CD9-202ENST00000382515 DPPA3Q6W0C5 159 aa13.03□□□□□ -0.32
CD9-202ENST00000382515 TRPT1Q86TN4 253 aaKnown RBP13.03□□□□□ -0.32
CD9-202ENST00000382515 TM2D3Q9BRN9 247 aa13.03□□□□□ -0.32
CD9-202ENST00000382515 A0A0J9YX75 114 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 CTXND1A0A1B0GTU2 59 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 CXorf1O96002 111 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 PYYP10082 97 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 RAB5CP51148 216 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 ZNF124Q15973 351 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 ARL6IP6Q8N6S5 226 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 ZNF738Q8NE65 137 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 SPATA25Q9BR10 227 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 TMEM167BQ9NRX6 74 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 TP53TG1Q9Y2A0 90 aa13.02□□□□□ -0.33
CD9-202ENST00000382515 KNCNA6PVL3 124 aa13.01□□□□□ -0.33
CD9-202ENST00000382515 UBE2L3P68036 154 aaKnown RBP13.01□□□□□ -0.33
CD9-202ENST00000382515 C9orf62Q8N4C0 152 aa13.01□□□□□ -0.33
CD9-202ENST00000382515 SUN5Q8TC36 379 aa13.01□□□□□ -0.33
CD9-202ENST00000382515 RPUSD4Q96CM3 377 aaKnown RBP13.01□□□□□ -0.33
CD9-202ENST00000382515 ZNF503Q96F45 646 aa13.01□□□□□ -0.33
CD9-202ENST00000382515 C20orf173Q96LM9 149 aa13.01□□□□□ -0.33
CD9-202ENST00000382515 C1QTNF4Q9BXJ3 329 aa13.01□□□□□ -0.33
CD9-202ENST00000382515 NDUFB4O95168 129 aa13□□□□□ -0.33
CD9-202ENST00000382515 RPL35AP18077 110 aaKnown RBP13□□□□□ -0.33
CD9-202ENST00000382515 CD300CQ08708 224 aa13□□□□□ -0.33
CD9-202ENST00000382515 FAM74A1Q5RGS3 127 aa13□□□□□ -0.33
CD9-202ENST00000382515 BLNKQ8WV28 456 aa13□□□□□ -0.33
CD9-202ENST00000382515 A8MTW9 85 aa12.99□□□□□ -0.33
CD9-202ENST00000382515 OR10J4P0C629 311 aa12.99□□□□□ -0.33
CD9-202ENST00000382515 IGFL4Q6B9Z1 124 aa12.99□□□□□ -0.33
CD9-202ENST00000382515 RNF182Q8N6D2 247 aa12.99□□□□□ -0.33
CD9-202ENST00000382515 OR8A1Q8NGG7 326 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms