RNA–Protein interactions for RNA: ENST00000381513.8

SMARCD1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCD1, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-201ENST00000381513 FOLR3P41439 243 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 FAM104BQ5XKR9 115 aa15.15■□□□□ 0.02
SMARCD1-201ENST00000381513 ATP5IP56385 69 aaPredicted RBP15.14■□□□□ 0.01
SMARCD1-201ENST00000381513 MRPL51Q4U2R6 128 aaKnown RBP15.14■□□□□ 0.01
SMARCD1-201ENST00000381513 LYZL6O75951 148 aa15.14■□□□□ 0.01
SMARCD1-201ENST00000381513 HES7Q9BYE0 225 aa15.14■□□□□ 0.01
SMARCD1-201ENST00000381513 HHLA3Q9XRX5 114 aa15.14■□□□□ 0.01
SMARCD1-201ENST00000381513 IGKV1D-37A0A075B6S9 117 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 WI2-2373I1.2A0A1W2PRP0 233 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 ODF1Q14990 250 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 A0A1B0GW15 77 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 TMEM8BA6NDV4 472 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 H3BVH4 76 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 FSTL3O95633 263 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 HCP5Q6MZN7 132 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 MAPKAPK5-AS1Q8N8E1 139 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 IGKV1D-17A0A075B6S4 117 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 TRAV40A0A0B4J280 105 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 IL4P05112 153 aa15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 SRSF6Q13247 344 aaKnown RBP15.13■□□□□ 0.01
SMARCD1-201ENST00000381513 TRBV20-1A0A075B6N2 111 aa15.12■□□□□ 0.01
SMARCD1-201ENST00000381513 SUB1P53999 127 aaKnown RBP eCLIP15.12■□□□□ 0.014e-6■■■■■ 28.5
SMARCD1-201ENST00000381513 DPM2O94777 84 aa15.12■□□□□ 0.01
SMARCD1-201ENST00000381513 TGFAP01135 160 aa15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 LYZP61626 148 aa15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 Q6AWC8 147 aa15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 PRRC2CQ9Y520 2896 aaKnown RBP15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 TWIST1Q15672 202 aa15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 DLX4Q92988 240 aaPredicted RBP15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 LAMTOR5O43504 91 aa15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 CCL4P13236 92 aa15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 WT1-ASQ06250 92 aa15.11■□□□□ 0.01
SMARCD1-201ENST00000381513 HOXA3O43365 443 aaPredicted RBP15.1■□□□□ 0.01
SMARCD1-201ENST00000381513 POU2AF1Q16633 256 aa15.1■□□□□ 0.01
SMARCD1-201ENST00000381513 CEP192Q8TEP8 1941 aa15.1■□□□□ 0.01
SMARCD1-201ENST00000381513 EPOPA6NHQ4 379 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 GP9P14770 177 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 FAM201AQ5SY85 155 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 NDUFA4L2Q9NRX3 87 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 TNFRSF1AP19438 455 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 LTBRP36941 435 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 SMCPP49901 116 aaPredicted RBP15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 RPL32P62910 135 aaKnown RBP15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 CFAP126Q5VTH2 177 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 RPEQ96AT9 228 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 OTORQ9NRC9 128 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 SCGB2A1O75556 95 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 EVI2AP22794 236 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 Q0VFX4 171 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 ZNF784Q8NCA9 323 aaPredicted RBP15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 DEFB108BQ8NET1 73 aa15.09■□□□□ 0.01
SMARCD1-201ENST00000381513 CADP27708 2225 aa15.08■□□□□ 0.01
SMARCD1-201ENST00000381513 MAP1LC3AQ9H492 121 aa15.08■□□□□ 0.01
SMARCD1-201ENST00000381513 NDUFA3O95167 84 aa15.08■□□□□ 0
SMARCD1-201ENST00000381513 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.08■□□□□ 0
SMARCD1-201ENST00000381513 PPDPFLQ8WWR9 84 aa15.08■□□□□ 0
SMARCD1-201ENST00000381513 OVOL3O00110 214 aa15.07■□□□□ 0
SMARCD1-201ENST00000381513 IGLV2-11P01706 119 aa15.07■□□□□ 0
SMARCD1-201ENST00000381513 PSMG4Q5JS54 123 aa15.07■□□□□ 0
SMARCD1-201ENST00000381513 RUSC1-AS1Q66K80 236 aa15.07■□□□□ 0
SMARCD1-201ENST00000381513 NCBP2LA6PVI3 153 aaKnown RBP15.07■□□□□ 0
SMARCD1-201ENST00000381513 SRSF1Q07955 248 aaKnown RBP eCLIP15.07■□□□□ 07e-6■□□□□ 10.7
SMARCD1-201ENST00000381513 KIR2DL4Q99706 377 aa15.07■□□□□ 0
SMARCD1-201ENST00000381513 MRPL35Q9NZE8 188 aaKnown RBP15.07■□□□□ 0
SMARCD1-201ENST00000381513 RBP4P02753 201 aa15.07■□□□□ 0
SMARCD1-201ENST00000381513 C17orf58Q2M2W7 97 aa15.07■□□□□ 0
SMARCD1-201ENST00000381513 ZNF785A8K8V0 405 aa15.06■□□□□ 0
SMARCD1-201ENST00000381513 ZCCHC24Q8N2G6 241 aaKnown RBP15.06■□□□□ 0
SMARCD1-201ENST00000381513 ATP6V0E2Q8NHE4 81 aa15.06■□□□□ 0
SMARCD1-201ENST00000381513 HIGD1AQ9Y241 93 aa15.06■□□□□ 0
SMARCD1-201ENST00000381513 LINC01549A6NIU2 74 aa15.06■□□□□ 0
SMARCD1-201ENST00000381513 LINC01548A6NM66 108 aa15.06■□□□□ 0
SMARCD1-201ENST00000381513 ARL3P36405 182 aa15.06■□□□□ 0
SMARCD1-201ENST00000381513 FAM110AQ9BQ89 295 aa15.06■□□□□ 0
SMARCD1-201ENST00000381513 MRPS17Q9Y2R5 130 aaKnown RBP15.06■□□□□ 0
SMARCD1-201ENST00000381513 ZNF493Q6ZR52 646 aa15.05■□□□□ 0
SMARCD1-201ENST00000381513 C8orf49Q96NF6 230 aa15.05■□□□□ 0
SMARCD1-201ENST00000381513 GAGE12JA6NER3 117 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 GAGE7O76087 117 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 GAGE12FP0CL80 117 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 GAGE12GP0CL81 117 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 GAGE12IP0CL82 117 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 CRIP1P50238 77 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 GAGE4Q13068 117 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 ZFP2Q6ZN57 461 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 TMEM158Q8WZ71 300 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 TTC32Q5I0X7 151 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 PIFOQ8TCI5 191 aa15.05■□□□□ -0
SMARCD1-201ENST00000381513 PLCE1Q9P212 2302 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 CCDC179H3BU77 68 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 GAGE2BQ13066 116 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 TAL2Q16559 108 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 GAGE2EQ4V326 116 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 THAP8Q8NA92 274 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 C17orf77Q96MU5 243 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 MRPL20Q9BYC9 149 aaKnown RBP15.04■□□□□ -0
SMARCD1-201ENST00000381513 GAGE2DQ9UEU5 116 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 M0R3E3 92 aa15.04■□□□□ -0
SMARCD1-201ENST00000381513 DUX4L9Q6RFH8 374 aaPredicted RBP15.04■□□□□ -0
SMARCD1-201ENST00000381513 DSCAML1Q8TD84 2053 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms